Genome: Bacillus thuringiensis serovar finitimus YBT-020 (NC_017200.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 163297-163452 (+)glmS163643-165446 (+)YBT020_00785

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		YBT020_00785Operon

DOOR ID: 1247034		YBT020_00780,
YBT020_00785		 View Structure
2 184029-184143 (-)SAM183129-183942 (-)YBT020_00875

Lipoprotein		YBT020_00875Operon

DOOR ID: 1247038		YBT020_00865,
YBT020_00870,
YBT020_00875		 View Structure
3 192466-192571 (+)SAM192706-193624 (+)YBT020_00920

Oligopeptide ABC transporter; permease protein		YBT020_00920Operon

DOOR ID: 1247040		YBT020_00920,
YBT020_00925,
YBT020_00930,
YBT020_00935,
YBT020_00940		 View Structure
4 205466-205572 (-)SAM203692-205333 (-)YBT020_00975

Extracellular solute-binding protein		YBT020_00975Single gene

DOOR ID: 3526326		YBT020_00975 View Structure
5 281972-282073 (+)purine282238-283777 (+)guaA

GMP synthase [glutamine-hydrolyzing] (GMP synthetase) (Glutamine amidotransferase)		YBT020_01395Single gene

DOOR ID: 3526362		YBT020_01395 (guaA) View Structure
6 283929-284030 (+)purine284157-285483 (+)YBT020_01400

Xanthine/uracil permease family protein		YBT020_01400Single gene

DOOR ID: 3526363		YBT020_01400 View Structure
7 329646-329747 (+)purine329857-330343 (+)YBT020_01480

N5-carboxyaminoimidazole ribonucleotide mutase (N5-CAIR mutase) (8) (5-(carboxyamino)imidazole ribonucleotide mutase)		YBT020_01480Operon

DOOR ID: 1247066		YBT020_01480,
YBT020_01485,
YBT020_01490,
YBT020_01495,
YBT020_01500,
YBT020_01505,
YBT020_01510,
YBT020_01515,
YBT020_01520,
YBT020_01525 (purN),
YBT020_01530 (purH)		 View Structure
8 354929-355035 (+)SAM355158-356178 (+)YBT020_01595

Methionine import ATP-binding protein MetN 		YBT020_01595Operon

DOOR ID: 1247069		YBT020_01595,
YBT020_01600,
YBT020_01605		 View Structure
9 392032-392133 (-)purine390633-391830 (-)YBT020_01755

Nucleoside transporter; NupC family protein		YBT020_01755Single gene

DOOR ID: 3526389		YBT020_01755 View Structure
10 473537-473649 (-)SAM472817-473450 (-)YBT020_02300

Putative cyclase		YBT020_02300Single gene

DOOR ID: 3526413		YBT020_02300 View Structure
11 503694-503803 (+)TPP503875-504682 (+)YBT020_02405

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)		YBT020_02405Operon

DOOR ID: 1247097		YBT020_02405,
YBT020_02410 (thiE)		 View Structure
12 508029-508113 (+)c-di-GMP-I508254-509994 (+)YBT020_02425

Methyl-accepting chemotaxis protein		YBT020_02425single gene

DOOR ID: 3526428		YBT020_02425 View Structure
13 510056-510157 (+)TPP510257-510578 (+)YBT020_02430

YBT020_02430Operon

DOOR ID: 1247098		YBT020_02430,
YBT020_02435,
YBT020_02440,
YBT020_02445		 View Structure
14 838863-838975 (+)TPP839220-839916 (+)YBT020_03905

Aminopyrimidine aminohydrolase 		YBT020_03905Operon

DOOR ID: 1247152		YBT020_03905,
YBT020_03910,
YBT020_03915,
YBT020_03920,
YBT020_03925,
YBT020_03930,
YBT020_03935,
YBT020_03940 (thiG),
YBT020_03945,
YBT020_03950		 View Structure
15 839036-839138 (+)TPP839220-839916 (+)YBT020_03905

Aminopyrimidine aminohydrolase 		YBT020_03905Operon

DOOR ID: 1247152		YBT020_03905,
YBT020_03910,
YBT020_03915,
YBT020_03920,
YBT020_03925,
YBT020_03930,
YBT020_03935,
YBT020_03940 (thiG),
YBT020_03945,
YBT020_03950		 View Structure
16 847036-847183 (+)ydaO-yuaA847276-847663 (+)YBT020_03955

YBT020_03955Operon

DOOR ID: 1247153		YBT020_03955,
YBT020_03960		 View Structure
17 848171-848316 (+)ydaO-yuaA848415-848520 (+)YBT020_03965

YBT020_03965Single gene

DOOR ID: 3526570		YBT020_03965 View Structure
18 949984-950167 (-)lysine948411-949836 (-)YBT020_04530

Arginine/ornithine antiporter		YBT020_04530Operon

DOOR ID: 1247178		YBT020_04525,
YBT020_04530		 View Structure
19 1442223-1442387 (-)yybP-ykoY1441336-1442131 (-)YBT020_07195

YBT020_07195Single gene

DOOR ID: 3526864		YBT020_07195 View Structure
20 1472007-1472050 (+)PreQ11472143-1472806 (+)YBT020_07355

7-cyano-7-deazaguanine synthase (0) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)		YBT020_07355Operon

DOOR ID: 1247281		YBT020_07355,
YBT020_07360,
YBT020_07365,
YBT020_07370		 View Structure
21 1534194-1534375 (+)lysine1534555-1535872 (+)YBT020_07745

Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (0)		YBT020_07745Single gene

DOOR ID: 3526920		YBT020_07745 View Structure
22 1535990-1536098 (+)SAM1536170-1536314 (+)YBT020_07750

YBT020_07750Single gene

DOOR ID: 3526921		YBT020_07750 View Structure
23 1548761-1548866 (+)SAM1548960-1550277 (+)YBT020_07820

Na+/H+ antiporter family protein		YBT020_07820Single gene

DOOR ID: 3526925		YBT020_07820 View Structure
24 1594272-1594411 (+)FMN1594573-1595152 (+)YBT020_08055

Riboflavin transporter		YBT020_08055Single gene

DOOR ID: 3526954		YBT020_08055 View Structure
25 1669049-1669150 (+)purine1669258-1669852 (+)YBT020_08490

Xanthine phosphoribosyltransferase (XPRTase) (2)		YBT020_08490Operon

DOOR ID: 1247323		YBT020_08490,
YBT020_08495		 View Structure
26 1681704-1681867 (+)ykoK1682212-1682938 (+)YBT020_08550

Cation transporter; putative		YBT020_08550Single gene

DOOR ID: 3526991		YBT020_08550 View Structure
27 1713817-1713861 (+)PreQ11713867-1714353 (+)YBT020_08645

YBT020_08645Single gene

DOOR ID: 3526999		YBT020_08645 View Structure
28 1864776-1864962 (-)lysine1863346-1864576 (-)YBT020_09470

Aspartokinase 		YBT020_09470Single gene

DOOR ID: 3527072		YBT020_09470 View Structure
29 1936922-1937068 (+)ydaO-yuaA1937212-1939039 (+)YBT020_09825

Amino acid permease		YBT020_09825Single gene

DOOR ID: 3527110		YBT020_09825 View Structure
30 1956997-1957102 (+)SAM1957165-1958452 (+)YBT020_09910

Multidrug resistance protein possible tetracycline resistance determinant		YBT020_09910Single gene

DOOR ID: 3527120		YBT020_09910 View Structure
31 2393411-2393531 (-)glycine2391935-2393303 (-)YBT020_12090

Sodium/alanine symporter family protein		YBT020_12090Single gene

DOOR ID: 3527346		YBT020_12090 View Structure
32 2570378-2570483 (+)TPP2570606-2571296 (+)YBT020_13030

Aminopyrimidine aminohydrolase 		YBT020_13030Single gene

DOOR ID: 3527454		YBT020_13030 View Structure
33 2604148-2604263 (+)SAM2604402-2604951 (+)YBT020_13245

YBT020_13245Operon

DOOR ID: 1247478		YBT020_13245,
YBT020_13250,
YBT020_13255,
YBT020_13260		 View Structure
34 2627193-2627292 (-)purine2625949-2627134 (-)YBT020_13350

Major facilitator superfamily MFS_1		YBT020_13350Single gene

DOOR ID: 3527491		YBT020_13350 View Structure
35 2961053-2961245 (+)lysine2961357-2962824 (+)YBT020_15245

Lysine-specific permease		YBT020_15245Single gene

DOOR ID: 3527662		YBT020_15245 View Structure
36 3101463-3101564 (-)SAM3100168-3101374 (-)YBT020_15870

Peptidase M20 domain-containing protein 2		YBT020_15870Single gene

DOOR ID: 3527726		YBT020_15870 View Structure
37 3184198-3184296 (-)SAM3183839-3184097 (-)YBT020_16275

YBT020_16275Single gene

DOOR ID: 3527783		YBT020_16275 View Structure
38 3225331-3225473 (+)ydaO-yuaA3225571-3225715 (+)YBT020_16535

YBT020_16535Single gene

DOOR ID: 3527816		YBT020_16535 View Structure
39 3646961-3647062 (-)purine3646001-3646727 (-)YBT020_18595

GntR family transcriptional regulator		YBT020_18595Single gene

DOOR ID: 3528034		YBT020_18595 View Structure
40 3859886-3860074 (+)cobalamin3860201-3862490 (+)YBT020_19690

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)		YBT020_19690Single gene

DOOR ID: 3528110		YBT020_19690 View Structure
41 3890914-3891055 (-)SAM3889640-3890822 (-)mtnK

Methylthioribose kinase (MTR kinase) (00)		YBT020_19855Operon

DOOR ID: 1247715		YBT020_19850 (mtnA),
YBT020_19855 (mtnK)		 View Structure
42 3893249-3893354 (+)SAM3893418-3894663 (+)mtnW

2;3-diketo-5-methylthiopentyl-1-phosphate enolase (DK-MTP-1-P enolase) (RuBisCO-like protein) (RLP)		YBT020_19870Operon

DOOR ID: 1247716		YBT020_19870 (mtnW),
YBT020_19875 (mtnX),
YBT020_19880 (mtnB),
YBT020_19885		 View Structure
43 3956134-3956277 (+)FMN3956575-3957688 (+)YBT020_20245

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		YBT020_20245Operon

DOOR ID: 1247727		YBT020_20245,
YBT020_20250,
YBT020_20255,
YBT020_20260 (ribH)		 View Structure
44 3986929-3987094 (+)ykoK3987426-3990132 (+)YBT020_20405

Magnesium-translocating P-type ATPase		YBT020_20405Operon

DOOR ID: 1247732		YBT020_20405,
YBT020_20410		 View Structure
45 4083927-4084036 (-)SAM4082023-4083856 (-)YBT020_20965

Bifunctional homocysteine S-methyltransferase/5;10-methylenetetrahydrofolate reductase protein (0)		YBT020_20965Operon

DOOR ID: 1247753		YBT020_20955,
YBT020_20960,
YBT020_20965		 View Structure
46 4084240-4084349 (+)SAM4084442-4085555 (+)YBT020_20970

Cystathionine gamma-synthase		YBT020_20970Operon

DOOR ID: 1247754		YBT020_20970,
YBT020_20975		 View Structure
47 4569310-4569431 (-)SAM4567942-4569142 (-)YBT020_23490

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		YBT020_23490Single gene

DOOR ID: 3528442		YBT020_23490 View Structure
48 4607923-4608024 (+)TPP4608110-4608779 (+)YBT020_23730

YBT020_23730Single gene

DOOR ID: 3528472		YBT020_23730 View Structure
49 4807512-4807619 (-)SAM4806186-4807212 (-)YBT020_24750

Methionine import ATP-binding protein MetN 		YBT020_24750Operon

DOOR ID: 1247907		YBT020_24735,
YBT020_24740,
YBT020_24745,
YBT020_24750		 View Structure
50 4899287-4899346 (+)fluoride4899370-4899805 (+)YBT020_25235

Putative fluoride ion transporter CrcB		YBT020_25235Operon

DOOR ID: 1247927		YBT020_25235,
YBT020_25240		 View Structure
51 5071709-5071824 (-)TPP5069835-5071596 (-)YBT020_26050

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		YBT020_26050Single gene

DOOR ID: 3528651		YBT020_26050 View Structure
52 5261208-5261312 (-)SAM5259816-5261115 (-)YBT020_26960

O-acetylhomoserine aminocarboxypropyltransferase (9)		YBT020_26960Operon

DOOR ID: 1247999		YBT020_26955,
YBT020_26960		 View Structure