Genome: Acetobacter pasteurianus IFO 3283-07 (NC_017121.1); Phylum: Alphaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 440659-440891 (+)cobalamin441025-443185 (+)APA07_04230

APA07_04230Operon

DOOR ID: 1001418
APA07_04230,
APA07_04240,
APA07_04250 (fecCD),
APA07_04260
View Structure
2 1402366-1402485 (+)TPP1402516-1403347 (+)APA07_13250

APA07_13250Single gene

DOOR ID: 3497904
APA07_13250 View Structure
3 1586777-1586959 (-)yybP-ykoY1586181-1586772 (-)APA07_14770

APA07_14770Single gene

DOOR ID: 3497965
APA07_14770 View Structure
4 1993589-1993668 (+)sam-alpha1993778-1994987 (+)APA07_18390

APA07_18390Single gene

DOOR ID: 3498118
APA07_18390 View Structure
5 2016504-2016650 (-)FMN2015351-2016404 (-)ribD

APA07_18580Operon

DOOR ID: 1001707
APA07_18530,
APA07_18540,
APA07_18550,
APA07_18560,
APA07_18570,
APA07_18580 (ribD)
View Structure
6 2429622-2429860 (+)cobalamin2429901-2430366 (+)APA07_22360

APA07_22360Single gene

DOOR ID: 3498252
APA07_22360 View Structure
7 2451723-2451960 (-)cobalamin2451115-2451544 (-)APA07_22540

APA07_22540Operon

DOOR ID: 1001785
APA07_22510 (cbiA),
APA07_22520 (cobN),
APA07_22530 (cobW),
APA07_22540
View Structure
8 2622815-2622900 (-)glycine2621518-2622655 (-)APA07_24240

APA07_24240Operon

DOOR ID: 1001818
APA07_24220,
APA07_24230,
APA07_24240
View Structure
9 2732768-2732921 (+)TPP2733004-2734882 (+)thiC

APA07_25230Single gene

DOOR ID: 3498353
APA07_25230 (thiC) View Structure
10 2742090-2742311 (-)cobalamin2740378-2741971 (-)oprB

APA07_25310Single gene

DOOR ID: 3498356
APA07_25310 (oprB) View Structure