Genome: Acetobacterium woodii DSM 1030 (NC_016894.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 10488-10671 (+)cobalamin10864-11617 (+)nifH1

Nitrogenase iron protein NifH 		Awo_c00100Operon

DOOR ID: 1225040		Awo_c00170,
Awo_c00160,
Awo_c00150,
Awo_c00140,
Awo_c00130,
Awo_c00120 (nifE2),
Awo_c00110 (nifE1),
Awo_c00100 (nifH1)		 View Structure
2 37272-37468 (+)cobalamin37782-38124 (+)Awo_c00340

Copper homeostasis operon regulatory protein		Awo_c00340Operon

DOOR ID: 1225044		Awo_c00350,
Awo_c00340		 View Structure
3 45469-45664 (+)cobalamin45881-47477 (+)oppA4

Oligopeptide ABC transport system substrate binding protein OppA4		Awo_c00420Operon

DOOR ID: 1225046		Awo_c00460 (oppF4),
Awo_c00450 (oppD4),
Awo_c00440 (oppC4),
Awo_c00430 (oppB4),
Awo_c00420 (oppA4)		 View Structure
4 60020-60134 (+)FMN60293-61382 (+)ribD

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		Awo_c00550Operon

DOOR ID: 1225048		Awo_c00560 (ribE),
Awo_c00550 (ribD)		 View Structure
5 100510-100558 (-)PreQ1100001-100502 (-)Awo_c00910

Awo_c00910Single gene

DOOR ID: 3422611		Awo_c00910 View Structure
6 200960-201057 (-)TPP199494-200808 (-)thiC1

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		Awo_c01780Single gene

DOOR ID: 3422646		Awo_c01780 (thiC1) View Structure
7 234342-234444 (+)c-di-GMP-I234733-235225 (+)Awo_c02000

Uncharacterized protein		Awo_c02000single gene

DOOR ID: 3422657		Awo_c02000 View Structure
8 386245-386408 (+)ykoK386765-387695 (+)corA1

Magnesium and cobalt transporter CorA1		Awo_c03390Single gene

DOOR ID: 3422691		Awo_c03390 (corA1) View Structure
9 387762-387891 (+)FMN387973-388543 (+)Awo_c03400

Riboflavin transporter		Awo_c03400Single gene

DOOR ID: 3422692		Awo_c03400 View Structure
10 432427-432602 (-)cobalamin431876-432338 (-)pduV1

Propanediol utilization protein PduV1		Awo_c03740Single gene

DOOR ID: 3422705		Awo_c03740 (pduV1) View Structure
11 512669-512851 (+)cobalamin513021-513714 (+)nrdG

Ribonucleoside-triphosphate reductase; anaerobic-like protein 		Awo_c04350Single gene

DOOR ID: 3422736		Awo_c04350 (nrdG) View Structure
12 582113-582290 (+)cobalamin582514-583612 (+)mtsB

Fe(III) ABC transport system permease protein MtsB		Awo_c05000Operon

DOOR ID: 1225148		Awo_c05020 (mtsC),
Awo_c05010 (mtsA),
Awo_c05000 (mtsB)		 View Structure
13 591648-591759 (+)TPP591954-592779 (+)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)		Awo_c05120Operon

DOOR ID: 1225150		Awo_c05160 (emrE),
Awo_c05150 (thiD),
Awo_c05140,
Awo_c05130 (thiE2),
Awo_c05120 (thiM)		 View Structure
14 700440-700609 (-)cobalamin699786-700290 (-)Awo_c06040

Awo_c06040Single gene

DOOR ID: 3422804		Awo_c06040 View Structure
15 937816-937950 (+)MOCO938158-939367 (+)moeA1

Molybdopterin biosynthesis protein MoeA1		Awo_c08130Operon

DOOR ID: 1225211		Awo_c08130 (moeA1),
Awo_c08140,
Awo_c08150 (selA),
Awo_c08160 (selB)		 View Structure
16 1049680-1049774 (+)Nico1049897-1052441 (+)Awo_c09060

Calcium-translocating P-type ATPase		Awo_c09060Operon

DOOR ID: 1225232		Awo_c09060,
Awo_c09070,
Awo_c09080 (glnP2),
Awo_c09090 (glnQ2)		 View Structure
17 1184595-1184789 (+)cobalamin1184900-1185683 (+)cbiJ1

Precorrin-6A reductase CbiJ1 (4)		Awo_c10230Operon

DOOR ID: 1225261		Awo_c10230 (cbiJ1),
Awo_c10240 (cbiQ1),
Awo_c10250 (cbiO1)		 View Structure
18 1188736-1188934 (+)cobalamin1189201-1190236 (+)btuC

Vitamin B12 import system permease protein BtuC		Awo_c10280Operon

DOOR ID: 1225263		Awo_c10280 (btuC),
Awo_c10290 (fepC),
Awo_c10300 (cbiZ1),
Awo_c10310,
Awo_c10320 (cobN1),
Awo_c10330 (chlI1),
Awo_c10340 (chlI2),
Awo_c10350		 View Structure
19 1260484-1260576 (-)THF1259787-1260348 (-)folE

GTP cyclohydrolase 1 (6) (GTP cyclohydrolase I) (GTP-CH-I)		Awo_c10940Operon

DOOR ID: 1225277		Awo_c10910 (folBK),
Awo_c10920 (folP),
Awo_c10930,
Awo_c10940 (folE)		 View Structure
20 1271769-1271861 (-)THF1270954-1271716 (-)Awo_c11060

Awo_c11060Single gene

DOOR ID: 3422984		Awo_c11060 View Structure
21 1499253-1499348 (+)SAM1499443-1500622 (+)metK

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		Awo_c12870Single gene

DOOR ID: 3423055		Awo_c12870 (metK) View Structure
22 1566910-1566991 (-)c-di-GMP-I1565805-1566831 (-)Awo_c13460

Serine proteinase		Awo_c13460single gene

DOOR ID: 3423068		Awo_c13460 View Structure
23 1567064-1567145 (-)c-di-GMP-I1565805-1566831 (-)Awo_c13460

Serine proteinase		Awo_c13460single gene

DOOR ID: 3423068		Awo_c13460 View Structure
24 1567210-1567292 (-)c-di-GMP-I1565805-1566831 (-)Awo_c13460

Serine proteinase		Awo_c13460single gene

DOOR ID: 3423068		Awo_c13460 View Structure
25 1708186-1708364 (-)cobalamin1706806-1708087 (-)thiC3

Thiamine biosynthesis protein ThiC3 		Awo_c14640Operon

DOOR ID: 1225359		Awo_c14630 (thiC2),
Awo_c14640 (thiC3)		 View Structure
26 1840156-1840226 (+)fluoride1840286-1841966 (+)Awo_c15600

Awo_c15600Single gene

DOOR ID: 3423175		Awo_c15600 View Structure
27 2116217-2116394 (-)cobalamin2115399-2116047 (-)Awo_c17870

Awo_c17870Single gene

DOOR ID: 3423274		Awo_c17870 View Structure
28 2239482-2239654 (-)lysine2238207-2239206 (-)asd

Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (1) (Aspartate-beta-semialdehyde dehydrogenase)		Awo_c18800Single gene

DOOR ID: 3423334		Awo_c18800 (asd) View Structure
29 2490702-2490776 (-)c-di-GMP-I2489320-2490688 (-)Awo_c21070

Uncharacterized protein		Awo_c21070single gene

DOOR ID: 3423426		Awo_c21070 View Structure
30 2490861-2490936 (-)c-di-GMP-I2489320-2490688 (-)Awo_c21070

Uncharacterized protein		Awo_c21070single gene

DOOR ID: 3423426		Awo_c21070 View Structure
31 2491004-2491079 (-)c-di-GMP-I2489320-2490688 (-)Awo_c21070

Uncharacterized protein		Awo_c21070single gene

DOOR ID: 3423426		Awo_c21070 View Structure
32 2790011-2790162 (-)glmS2788173-2789997 (-)glmS

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		Awo_c23780Single gene

DOOR ID: 3423498		Awo_c23780 (glmS) View Structure
33 2859560-2859635 (-)c-di-GMP-I2858035-2859532 (-)Awo_c24410

Uncharacterized protein		Awo_c24410single gene

DOOR ID: 3423512		Awo_c24410 View Structure
34 2946341-2946427 (-)c-di-GMP-I2944499-2946005 (-)Awo_c25200

Uncharacterized protein		Awo_c25200operon

DOOR ID: 1225562		Awo_c25180,
Awo_c25190 (flgD),
Awo_c25200		 View Structure
35 3185660-3185718 (+)fluoride3185794-3186232 (+)crcB1

Putative fluoride ion transporter CrcB		Awo_c27220Operon

DOOR ID: 1225601		Awo_c27220 (crcB1),
Awo_c27230 (crcB2)		 View Structure
36 3267897-3267992 (-)SAM3265313-3267695 (-)metH

Methionine synthase MetH (3)		Awo_c28010Single gene

DOOR ID: 3423620		Awo_c28010 (metH) View Structure
37 3488901-3489079 (-)cobalamin3487183-3488476 (-)hemA

Glutamyl-tRNA reductase (GluTR) (0)		Awo_c30310Operon

DOOR ID: 1225663		Awo_c30300,
Awo_c30310 (hemA)		 View Structure
38 3504499-3504684 (-)cobalamin3503178-3504060 (+)Awo_c30410

Awo_c30410Single gene

DOOR ID: 3423687		Awo_c30410 View Structure
39 3519388-3519575 (-)cobalamin3518320-3519262 (-)Awo_c30550

Putative metal ABC transport system substrate-binding protein		Awo_c30550Single gene

DOOR ID: 3423688		Awo_c30550 View Structure
40 3536552-3536685 (-)cobalamin3534162-3536316 (-)Awo_c30660

Awo_c30660Single gene

DOOR ID: 3423692		Awo_c30660 View Structure
41 3761557-3761664 (-)glycine3761010-3761388 (-)gcvH3

Glycine cleavage system H protein		Awo_c32810Operon

DOOR ID: 1225715		Awo_c32780 (gcvPB),
Awo_c32790 (gcvPA),
Awo_c32800 (gcvT),
Awo_c32810 (gcvH3)		 View Structure