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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
554624-554714
(-)
THF
554021-554579 (-)
Sinf_0532
Putative membrane protein
Sinf_0532
Single gene
DOOR ID:
3400608
Sinf_0532
View Structure
2
591680-591934
(+)
FMN
592153-593209 (+)
ribD
Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
Sinf_0572
Operon
DOOR ID:
1332300
Sinf_0575
(ribH)
,
Sinf_0574
(ribA)
,
Sinf_0573
(ribE)
,
Sinf_0572
(ribD)
View Structure
3
596162-596259
(-)
TPP
595526-596093 (-)
Sinf_0576
Putative proton-coupled thiamine transporter YuaJ
Sinf_0576
Single gene
DOOR ID:
3400623
Sinf_0576
View Structure
4
635895-636007
(+)
preQ1-II
636623-638582 (+)
ligA
DNA ligase (Polydeoxyribonucleotide synthase [NAD(+)])
Sinf_0608
Operon
DOOR ID:
1332306
Sinf_0609,
Sinf_0608
(ligA)
View Structure
5
853735-853830
(+)
purine
854008-854590 (+)
xpt
Xanthine phosphoribosyltransferase (XPRTase) (2)
Sinf_0832
Operon
DOOR ID:
1332355
Sinf_0833
(pbuX)
,
Sinf_0832
(xpt)
View Structure
6
1041867-1041956
(-)
TPP
1041116-1041698 (-)
thiW
ThiW protein
Sinf_1017
Operon
DOOR ID:
1332398
Sinf_1016,
Sinf_1017
(thiW)
View Structure
7
1050060-1050239
(+)
glycine
1050373-1051705 (+)
Sinf_1024
Sodium:alanine symporter family protein
Sinf_1024
Single gene
DOOR ID:
3400767
Sinf_1024
View Structure
8
1339471-1339514
(+)
PreQ1
1339623-1340607 (+)
Sinf_1310
PreQ1-regulate dinosine-uridine nucleoside hydrolase
Sinf_1310
Operon
DOOR ID:
1332465
Sinf_1310,
Sinf_1311
View Structure
9
1548922-1549078
(-)
FMN
1548276-1548843 (-)
Sinf_1525
Riboflavin transporter
Sinf_1525
Single gene
DOOR ID:
3400942
Sinf_1525
View Structure
Genome:
Streptococcus infantarius subsp. infantarius CJ18
(
NC_016826.1
);
Phylum:
Firmicutes
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