RiboswitchDB

Genome: Corynebacterium diphtheriae CDCE 8392 (NC_016785.1); Phylum: Actinobacteria

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

28730-28840 (+)

TPP

28840-30640 (+)

thiC

Operon

DOOR ID: 1327412

CDCE8392_0027 (thiO),
CDCE8392_0026 (thiE),
CDCE8392_0025 (thiC)

2

540339-540544 (+)

cobalamin

540653-541004 (+)

CDCE8392_0546

Operon

DOOR ID: 1327527

CDCE8392_0547,
CDCE8392_0546

3

811708-811908 (+)

cobalamin

812401-813832 (-)

gapB

Single gene

DOOR ID: 3373859

CDCE8392_0800 (gapB)

4

872958-873089 (+)

TPP

873685-874861 (-)

CDCE8392_0858

Single gene

DOOR ID: 3373889

CDCE8392_0858

5

874898-875010 (+)

TPP

876380-877136 (+)

CDCE8392_0860

Operon

DOOR ID: 1327592

CDCE8392_0859,
CDCE8392_0860,
CDCE8392_0861

6

1016151-1016351 (+)

cobalamin

1016403-1017444 (+)

CDCE8392_0990

Operon

DOOR ID: 1327625

CDCE8392_0990,
CDCE8392_0991,
CDCE8392_0992

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