Genome: Bacteroides fragilis 638R (NC_016776.1); Phylum: Bacteroidetes/Chlorobi group
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 729872-729967 (-)TPP727652-729872 (-)BF638R_0611

Putative TonB-dependent transmembrane receptor protein
BF638R_0611Operon

DOOR ID: 1212281
BF638R_0611,
BF638R_0610 (pnuC),
BF638R_0609
View Structure
2 1850314-1850522 (-)cobalamin1848107-1850144 (-)btuB

Putative vitamin B12 receptor
BF638R_1581Operon

DOOR ID: 1212503
BF638R_1583,
BF638R_1582,
BF638R_1581 (btuB),
BF638R_1580
View Structure
3 2106910-2107102 (+)cobalamin2107256-2108174 (+)BF638R_1789

BF638R_1789Single gene

DOOR ID: 3364650
BF638R_1789 View Structure
4 2940518-2940729 (-)cobalamin2938480-2940169 (-)BF638R_2500

Putative membrane protein
BF638R_2500Single gene

DOOR ID: 3364860
BF638R_2500 View Structure
5 2941013-2941260 (+)cobalamin2941315-2943388 (+)BF638R_2501

Putative iron transport-related exported protein
BF638R_2501Single gene

DOOR ID: 3364861
BF638R_2501 View Structure
6 3000465-3000557 (+)TPP3000627-3000825 (+)BF638R_2546

Putative thiamine biosynthesis-related protein
BF638R_2546Operon

DOOR ID: 1212707
BF638R_2546,
BF638R_2547
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7 3172413-3172620 (-)cobalamin3171371-3172349 (-)BF638R_2703

BF638R_2703Single gene

DOOR ID: 3364924
BF638R_2703 View Structure
8 3195087-3195309 (+)cobalamin3195373-3197893 (+)BF638R_2722

Ribonucleoside-diphosphate reductase
BF638R_2722Operon

DOOR ID: 1212747
BF638R_2722,
BF638R_2723
View Structure
9 3977837-3978056 (+)cobalamin3978193-3979708 (+)accC2

Putative biotin carboxylase 2 (4)
BF638R_3365Operon

DOOR ID: 1212883
BF638R_3365 (accC2),
BF638R_3366,
BF638R_3367
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10 4139260-4139443 (+)cobalamin4139476-4141870 (+)BF638R_3508

Putative anaerobic ribonucleoside-triphosphate reductase
BF638R_3508Operon

DOOR ID: 1212907
BF638R_3508,
BF638R_3509
View Structure