Genome: Bacillus subtilis subsp. spizizenii TU-B-10 (NC_016047.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 314765-314935 (+)glmS315023-316826 (+)glmS

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		GYO_0375Single gene

DOOR ID: 3284493		GYO_0375 (glmS) View Structure
2 601712-601856 (+)ydaO-yuaA602049-603873 (+)GYO_0650

GYO_0650Single gene

DOOR ID: 3284611		GYO_0650 View Structure
3 618383-618513 (+)ydaO-yuaA618586-619825 (+)GYO_0668

Proton/sodium-glutamate symport protein		GYO_0668Single gene

DOOR ID: 3284623		GYO_0668 View Structure
4 755287-755386 (-)purine754065-755232 (-)GYO_0838

Transporter; major facilitator superfamily		GYO_0838Single gene

DOOR ID: 3284705		GYO_0838 View Structure
5 813166-813267 (+)purine813402-814725 (+)GYO_0897

Permease family protein		GYO_0897Single gene

DOOR ID: 3284720		GYO_0897 View Structure
6 817109-817210 (+)purine817350-817839 (+)purE

N5-carboxyaminoimidazole ribonucleotide mutase (N5-CAIR mutase) (8) (5-(carboxyamino)imidazole ribonucleotide mutase)		GYO_0902Operon

DOOR ID: 927851		GYO_0902 (purE),
GYO_0903 (purK),
GYO_0904 (purB),
GYO_0905 (purC),
GYO_0906 (purS),
GYO_0907 (purQ),
GYO_0908 (purL),
GYO_0909 (purF),
GYO_0910 (purM),
GYO_0911 (purN),
GYO_0912 (purH),
GYO_0913 (purD)		 View Structure
7 1067271-1067378 (+)TPP1067437-1067572 (+)GYO_1165

GYO_1165Operon

DOOR ID: 927893		GYO_1165,
GYO_1166 (thiC)		 View Structure
8 1352390-1352498 (+)TPP1352579-1353287 (+)GYO_1470

Aminopyrimidine aminohydrolase 		GYO_1470Operon

DOOR ID: 927952		GYO_1470,
GYO_1471,
GYO_1472 (thiO),
GYO_1473 (thiS),
GYO_1474 (thiG),
GYO_1475,
GYO_1476		 View Structure
9 1368448-1368571 (+)SAM1368615-1369761 (+)metI

Cystathionine gamma-synthase (8)		GYO_1494Operon

DOOR ID: 927956		GYO_1494 (metI),
GYO_1495 (metC)		 View Structure
10 1483294-1483405 (+)ykkC-yxkD1483482-1483821 (+)GYO_1628

Multidrug resistance protein YkkC		GYO_1628Operon

DOOR ID: 927978		GYO_1628,
GYO_1629		 View Structure
11 1494334-1494489 (-)SAM1494202-1494328 (-)GYO_1640

GYO_1640Operon

DOOR ID: 927980		GYO_1639 (metE),
GYO_1640		 View Structure
12 1500335-1500446 (-)TPP1499635-1500238 (-)GYO_1647

Ykof-related family protein		GYO_1647Operon

DOOR ID: 927982		GYO_1644,
GYO_1645,
GYO_1646,
GYO_1647		 View Structure
13 1504215-1504382 (+)ykoK1504473-1504596 (+)GYO_1653

GYO_1653Operon

DOOR ID: 927983		GYO_1653,
GYO_1654 (mgtE)		 View Structure
14 1519337-1519442 (+)yybP-ykoY1520607-1521363 (+)sigI

RNA polymerase sigma factor SigI		GYO_1670Operon

DOOR ID: 927986		GYO_1670 (sigI),
GYO_1671		 View Structure
15 1533270-1533424 (-)SAM1531966-1533160 (-)mtnK

Methylthioribose kinase (MTR kinase) (00)		GYO_1683Operon

DOOR ID: 927989		GYO_1682 (mtnA),
GYO_1683 (mtnK)		 View Structure
16 1535618-1535718 (+)SAM1535801-1537019 (+)mtnW

2;3-diketo-5-methylthiopentyl-1-phosphate enolase (DK-MTP-1-P enolase) (RuBisCO-like protein) (RLP)		GYO_1686Operon

DOOR ID: 927990		GYO_1686 (mtnW),
GYO_1687 (mtnX),
GYO_1688 (mtnB),
GYO_1689		 View Structure
17 1548024-1548068 (+)PreQ11548196-1548856 (+)GYO_1701

7-cyano-7-deazaguanine synthase (0) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)		GYO_1701Operon

DOOR ID: 927992		GYO_1701,
GYO_1702 (queD),
GYO_1703 (queE),
GYO_1704 (queF)		 View Structure
18 1710947-1711048 (+)TPP1711135-1712416 (+)GYO_1882

Peptidase; ArgE/DapE family protein 		GYO_1882Single gene

DOOR ID: 3285133		GYO_1882 View Structure
19 1733696-1733801 (+)SAM1733965-1734667 (+)GYO_1906

Phosphoadenosine phosphosulfate reductase (3'-phosphoadenylylsulfate reductase) (PAPS reductase; thioredoxin dependent) (PAPS sulfotransferase) (PAdoPS reductase)		GYO_1906Operon

DOOR ID: 928031		GYO_1906,
GYO_1907,
GYO_1908 (sat),
GYO_1909 (cysC),
GYO_1910 (cobA),
GYO_1911,
GYO_1912		 View Structure
20 2130443-2130534 (-)SAM2129323-2130325 (-)GYO_2234

Putative D-isomer specific 2-hydroxyacid dehydrogenase		GYO_2234Operon

DOOR ID: 928087		GYO_2233,
GYO_2234		 View Structure
21 2286661-2286760 (-)purine2285986-2286571 (-)xpt

Xanthine phosphoribosyltransferase (XPRTase) (2)		GYO_2432Operon

DOOR ID: 928124		GYO_2431,
GYO_2432 (xpt)		 View Structure
22 2377335-2377469 (-)FMN2376612-2377182 (-)GYO_2537

Riboflavin transporter		GYO_2537Single gene

DOOR ID: 3285372		GYO_2537 View Structure
23 2398065-2398209 (-)FMN2396849-2397935 (-)ribD

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		GYO_2561Operon

DOOR ID: 928151		GYO_2558 (ribH),
GYO_2559 (ribA),
GYO_2560 (ribE),
GYO_2561 (ribD)		 View Structure
24 2530168-2530269 (-)glycine2528904-2529993 (-)gcvT

Aminomethyltransferase (0) (Glycine cleavage system T protein)		GYO_2717Operon

DOOR ID: 928183		GYO_2715,
GYO_2716,
GYO_2717 (gcvT)		 View Structure
25 2856827-2857006 (-)lysine2855471-2856701 (-)lysC

Aspartokinase 		GYO_3093Single gene

DOOR ID: 3285563		GYO_3093 (lysC) View Structure
26 3068027-3068165 (-)SAM3066656-3067859 (-)metK

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		GYO_3307Single gene

DOOR ID: 3285639		GYO_3307 (metK) View Structure
27 3118044-3118145 (+)TPP3118245-3118824 (+)GYO_3377

Putative proton-coupled thiamine transporter YuaJ		GYO_3377Single gene

DOOR ID: 3285654		GYO_3377 View Structure
28 3127149-3127297 (+)ydaO-yuaA3127369-3128038 (+)GYO_3387

Potassium transport system NAD-binding component		GYO_3387Operon

DOOR ID: 928325		GYO_3387,
GYO_3388		 View Structure
29 3311745-3311851 (-)SAM3310613-3311639 (-)GYO_3576

Methionine import ATP-binding protein MetN 		GYO_3576Operon

DOOR ID: 928360		GYO_3574,
GYO_3575,
GYO_3576		 View Structure
30 3352142-3352282 (-)cobalamin3351092-3352037 (-)GYO_3625

YvrC		GYO_3625Single gene

DOOR ID: 3285751		GYO_3625 View Structure
31 3368897-3369076 (-)lysine3367382-3368792 (-)GYO_3644

YvsH		GYO_3644Single gene

DOOR ID: 3285758		GYO_3644 View Structure
32 3978871-3978973 (-)ykkC-yxkD3977964-3978801 (-)GYO_4288

YxkD		GYO_4288Single gene

DOOR ID: 3285986		GYO_4288 View Structure
33 3986412-3986518 (+)SAM3986524-3987736 (+)GYO_4300

YxjG		GYO_4300Single gene

DOOR ID: 3285992		GYO_4300 View Structure
34 3987805-3987911 (+)SAM3987988-3989125 (+)GYO_4301

YxjG (4)		GYO_4301Single gene

DOOR ID: 3285993		GYO_4301 View Structure
35 3994179-3994280 (+)purine3994407-3995601 (+)GYO_4307

Nucleoside permease		GYO_4307Single gene

DOOR ID: 3285995		GYO_4307 View Structure
36 4169536-4169620 (-)yybP-ykoY4168859-4169306 (-)GYO_4475

YybP		GYO_4475Single gene

DOOR ID: 3286063		GYO_4475 View Structure