Genome: Streptomyces violaceusniger Tu 4113 (NC_015957.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 339734-339903 (+)ydaO-yuaA339914-341105 (+)Strvi_0560

Peptidase M23		Strvi_0560Single gene

DOOR ID: 3260749		Strvi_0560 View Structure
2 558267-558332 (-)ykkC-III557914-558235 (-)Strvi_0755

Strvi_0755single gene

DOOR ID: 3260856		Strvi_0755 View Structure
3 1417623-1417766 (-)cobalamin1415072-1417487 (-)Strvi_1543

Ribonucleoside-diphosphate reductase 		Strvi_1543Operon

DOOR ID: 916093		Strvi_1542,
Strvi_1543		 View Structure
4 1718657-1718767 (-)glycine1717359-1718487 (-)Strvi_1820

Aminomethyltransferase (0) (Glycine cleavage system T protein)		Strvi_1820Single gene

DOOR ID: 3261343		Strvi_1820 View Structure
5 1895536-1895640 (+)TPP1896687-1898418 (+)Strvi_1986

ABC-type transporter; integral membrane subunit		Strvi_1986Operon

DOOR ID: 916180		Strvi_1985,
Strvi_1986,
Strvi_1987		 View Structure
6 2128397-2128560 (+)ydaO-yuaA2128574-2129369 (+)Strvi_2159

Peptidase M23		Strvi_2159Single gene

DOOR ID: 3261506		Strvi_2159 View Structure
7 3208244-3208374 (+)FMN3208529-3209639 (+)Strvi_3101

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		Strvi_3101Operon

DOOR ID: 916386		Strvi_3101,
Strvi_3102,
Strvi_3103		 View Structure
8 3976525-3976608 (+)cobalamin3976661-3980303 (+)Strvi_3783

Cobaltochelatase; CobN subunit		Strvi_3783Single gene

DOOR ID: 3262156		Strvi_3783 View Structure
9 4080158-4080304 (-)SAM-IV4078981-4079827 (-)Strvi_3838

Glutathione S-transferase domain-containing protein		Strvi_3838Single gene

DOOR ID: 3262175		Strvi_3838 View Structure
10 4795408-4795537 (+)cobalamin4795621-4796005 (+)Strvi_4300

Strvi_4300Single gene

DOOR ID: 3262368		Strvi_4300 View Structure
11 5563511-5563590 (+)ZMP-ZTP5564101-5564230 (-)Strvi_5011

Strvi_5011Single gene

DOOR ID: 3262630		Strvi_5011 View Structure
12 5585257-5585341 (+)SAH5586143-5586407 (+)Strvi_5033

Putative cytoplasmic protein		Strvi_5033Operon

DOOR ID: 916751		Strvi_5031,
Strvi_5032,
Strvi_5033		 View Structure
13 6466035-6466132 (-)glycine6462927-6465843 (-)Strvi_5682

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))		Strvi_5682Single gene

DOOR ID: 3262949		Strvi_5682 View Structure
14 6682599-6682745 (-)cobalamin6682339-6682561 (-)Strvi_5854

Strvi_5854Operon

DOOR ID: 916881		Strvi_5853,
Strvi_5854		 View Structure
15 6886894-6887116 (+)cobalamin6887279-6889598 (+)Strvi_6000

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)		Strvi_6000Single gene

DOOR ID: 3263115		Strvi_6000 View Structure
16 6939700-6939914 (-)cobalamin6938598-6939639 (-)Strvi_6053

ABC-type transporter; periplasmic subunit		Strvi_6053Operon

DOOR ID: 916910		Strvi_6050,
Strvi_6051,
Strvi_6052,
Strvi_6053		 View Structure
17 7085965-7086029 (+)SAH7086498-7086831 (+)Strvi_6188

Strvi_6188Single gene

DOOR ID: 3263209		Strvi_6188 View Structure
18 7951707-7951860 (+)cobalamin7952034-7953018 (+)Strvi_6938

Cobalamin biosynthesis protein CobD		Strvi_6938Operon

DOOR ID: 917057		Strvi_6938,
Strvi_6939,
Strvi_6940,
Strvi_6941,
Strvi_6942,
Strvi_6943		 View Structure
19 8225045-8225158 (+)TPP8225215-8226391 (+)Strvi_7190

Glycine oxidase ThiO		Strvi_7190Operon

DOOR ID: 917101		Strvi_7190,
Strvi_7191,
Strvi_7192		 View Structure
20 8261680-8261798 (-)SAM-IV8260084-8261479 (-)Strvi_7224

Aminotransferase class V		Strvi_7224Single gene

DOOR ID: 3263647		Strvi_7224 View Structure
21 8468936-8469010 (+)cobalamin8469183-8470494 (+)Strvi_7413

Prenyltransferase/squalene oxidase		Strvi_7413Operon

DOOR ID: 917141		Strvi_7413,
Strvi_7414,
Strvi_7415,
Strvi_7416,
Strvi_7417		 View Structure
22 9808118-9808285 (-)ydaO-yuaA9807396-9808110 (-)Strvi_8502

Transglycosylase-like domain protein		Strvi_8502Single gene

DOOR ID: 3264238		Strvi_8502 View Structure
23 9943241-9943338 (-)ZMP-ZTP9941929-9943201 (-)Strvi_8628

Serine hydroxymethyltransferase (SHMT) (Serine methylase) 		Strvi_8628Single gene

DOOR ID: 3264299		Strvi_8628 View Structure
24 9988899-9989070 (+)ydaO-yuaA9989076-9990237 (+)Strvi_8663

NLP/P60 protein		Strvi_8663Single gene

DOOR ID: 3264311		Strvi_8663 View Structure
25 10109257-10109398 (-)SAM10107936-10109238 (-)Strvi_8757

Threonine synthase		Strvi_8757Operon

DOOR ID: 917377		Strvi_8756,
Strvi_8757		 View Structure
26 10484586-10484757 (-)TPP10482940-10484506 (-)Strvi_9075

Oxidoreductase		Strvi_9075Single gene

DOOR ID: 3264519		Strvi_9075 View Structure
27 10604582-10604699 (-)TPP10601524-10602664 (+)Strvi_9181

Beta-lactamase		Strvi_9181Single gene

DOOR ID: 3264590		Strvi_9181 View Structure