Genome: Salmonella bongori NCTC 12419 (NC_015761.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 107955-108054 (-)TPP106938-107922 (-)tbpA

Thiamine-binding periplasmic protein
SBG_0094Operon

DOOR ID: 901548
SBG_0092 (yabJ),
SBG_0093 (yabK),
SBG_0094 (tbpA)
View Structure
2 370152-370202 (-)SAH368317-368593 (+)SBG_0318

Putative secreted protein
SBG_0318Single gene

DOOR ID: 3231897
SBG_0318 View Structure
3 757959-758005 (+)SAM-SAH758031-759315 (-)SBG_0671

Putative pectin esterase (1)
SBG_0671Single gene

DOOR ID: 3232040
SBG_0671 View Structure
4 782737-782882 (+)MOCO783880-784393 (+)moaB

Molybdenum cofactor biosynthesis protein B
SBG_0691Operon

DOOR ID: 901667
SBG_0690 (moaA),
SBG_0691 (moaB),
SBG_0692 (moaC),
SBG_0693 (moaD),
SBG_0694 (moaE),
SBG_0695
View Structure
5 1846468-1846569 (+)yybP-ykoY1846626-1847247 (+)SBG_1690

Probable manganese efflux pump MntP
SBG_1690Single gene

DOOR ID: 3232481
SBG_1690 View Structure
6 2135130-2135227 (-)TPP2134300-2135098 (-)SBG_1960

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
SBG_1960Operon

DOOR ID: 901891
SBG_1958,
SBG_1959 (thiD),
SBG_1960
View Structure
7 3062698-3062895 (-)FMN3061938-3062592 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
SBG_2788Single gene

DOOR ID: 3232854
SBG_2788 (ribB) View Structure
8 3184276-3184403 (-)glycine3182279-3183440 (-)SBG_2909

Putative amino acid permease
SBG_2909Single gene

DOOR ID: 3232896
SBG_2909 View Structure
9 3994867-3995063 (+)cobalamin3995127-3996972 (+)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)
SBG_3620Operon

DOOR ID: 902228
SBG_3620 (btuB),
SBG_3621 (murI)
View Structure
10 4027085-4027178 (-)TPP4025104-4027000 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
SBG_3638Operon

DOOR ID: 902235
SBG_3636 (thiF),
SBG_3637 (thiE),
SBG_3638 (thiC)
View Structure
11 4230021-4230065 (+)mini-ykkC4230086-4230404 (+)sugE

SBG_3787Single gene

DOOR ID: 3233243
SBG_3787 (sugE) View Structure
12 4323998-4324109 (+)Mg sensor4324204-4326913 (+)mgtA

Mg(2+) transport ATPase; P-type
SBG_3879Single gene

DOOR ID: 3233281
SBG_3879 (mgtA) View Structure