Genome: Selenomonas sputigena ATCC 35185 (NC_015437.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 296399-296576 (+)cobalamin296697-298863 (+)Selsp_0269

TonB-dependent receptor		Selsp_0269Operon

DOOR ID: 844068		Selsp_0269,
Selsp_0270,
Selsp_0271		 View Structure
2 510546-510650 (+)TPP510702-510897 (+)Selsp_0452

Thiamine biosynthesis protein ThiS		Selsp_0452Operon

DOOR ID: 844102		Selsp_0452,
Selsp_0453,
Selsp_0454,
Selsp_0455,
Selsp_0456,
Selsp_0457		 View Structure
3 544437-544634 (+)cobalamin544900-547357 (+)Selsp_0487

TonB-dependent receptor plug		Selsp_0487Operon

DOOR ID: 844107		Selsp_0487,
Selsp_0488,
Selsp_0489,
Selsp_0490		 View Structure
4 784061-784164 (+)TPP784270-785578 (+)Selsp_0695

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		Selsp_0695Operon

DOOR ID: 844154		Selsp_0695,
Selsp_0696		 View Structure
5 816499-816652 (+)glmS816718-818548 (+)Selsp_0724

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		Selsp_0724Operon

DOOR ID: 844159		Selsp_0724,
Selsp_0725		 View Structure
6 1024086-1024260 (+)cobalamin1024492-1026691 (+)Selsp_0914

Methylmalonyl-CoA mutase; large subunit (Putative methylmalonyl-CoA mutase; small subunit)		Selsp_0914Operon

DOOR ID: 844189		Selsp_0914,
Selsp_0915,
Selsp_0916,
Selsp_0917,
Selsp_0918,
Selsp_0919,
Selsp_0920,
Selsp_0921,
Selsp_0922,
Selsp_0923,
Selsp_0924,
Selsp_0925,
Selsp_0926,
Selsp_0927,
Selsp_0928,
Selsp_0929,
Selsp_0930,
Selsp_0931,
Selsp_0932		 View Structure
7 1257280-1257530 (+)cobalamin1257758-1258703 (+)Selsp_1120

ABC-type transporter; integral membrane subunit		Selsp_1120Operon

DOOR ID: 844216		Selsp_1120,
Selsp_1121,
Selsp_1122,
Selsp_1123,
Selsp_1124,
Selsp_1125,
Selsp_1126,
Selsp_1127,
Selsp_1128,
Selsp_1129,
Selsp_1130,
Selsp_1131,
Selsp_1132,
Selsp_1133,
Selsp_1134,
Selsp_1135,
Selsp_1136,
Selsp_1137,
Selsp_1138,
Selsp_1139,
Selsp_1140,
Selsp_1141		 View Structure
8 1374397-1374576 (-)cobalamin1372253-1374230 (-)Selsp_1213

TonB-dependent receptor plug domain protein		Selsp_1213Operon

DOOR ID: 844228		Selsp_1199,
Selsp_1200,
Selsp_1201,
Selsp_1202,
Selsp_1203,
Selsp_1204,
Selsp_1205,
Selsp_1206,
Selsp_1207,
Selsp_1208,
Selsp_1209,
Selsp_1210,
Selsp_1211,
Selsp_1212,
Selsp_1213		 View Structure
9 1535891-1536068 (-)cobalamin1534727-1535711 (-)Selsp_1382

ABC-type transporter; periplasmic subunit		Selsp_1382Operon

DOOR ID: 844250		Selsp_1375,
Selsp_1376,
Selsp_1377,
Selsp_1378,
Selsp_1379,
Selsp_1380,
Selsp_1381,
Selsp_1382		 View Structure
10 1570396-1570574 (-)cobalamin1569019-1570018 (-)Selsp_1415

Cobalt chelatase (CbiK) 		Selsp_1415Single gene

DOOR ID: 3121298		Selsp_1415 View Structure
11 1579920-1580092 (-)cobalamin1578148-1579732 (-)Selsp_1422

ABC-type transporter; periplasmic subunit		Selsp_1422Operon

DOOR ID: 844257		Selsp_1418,
Selsp_1419,
Selsp_1420,
Selsp_1421,
Selsp_1422		 View Structure
12 1654354-1654498 (-)FMN1653063-1654167 (-)Selsp_1504

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		Selsp_1504Operon

DOOR ID: 844263		Selsp_1497,
Selsp_1498,
Selsp_1499,
Selsp_1500,
Selsp_1501,
Selsp_1502,
Selsp_1503,
Selsp_1504		 View Structure
13 1655294-1655463 (-)ydaO-yuaA1654624-1655287 (-)Selsp_1505

NLP/P60 protein		Selsp_1505Single gene

DOOR ID: 3121299		Selsp_1505 View Structure
14 1788942-1789046 (-)SAM1787561-1788749 (-)Selsp_1619

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		Selsp_1619Operon

DOOR ID: 844289		Selsp_1618,
Selsp_1619		 View Structure
15 1945158-1945351 (-)cobalamin1943611-1944781 (-)Selsp_1774

ABC-type transporter; periplasmic subunit (Periplasmic binding protein)		Selsp_1774Operon

DOOR ID: 844315		Selsp_1772,
Selsp_1773,
Selsp_1774		 View Structure
16 2022514-2022681 (-)cobalamin2014929-2022219 (-)Selsp_1832

Outer membrane autotransporter barrel domain protein		Selsp_1832Operon

DOOR ID: 844322		Selsp_1831,
Selsp_1832		 View Structure
17 2024993-2025197 (-)cobalamin2022830-2024765 (-)Selsp_1833

TonB-dependent receptor		Selsp_1833Single gene

DOOR ID: 3121331		Selsp_1833 View Structure
18 2314123-2314298 (+)cobalamin2314331-2316023 (+)Selsp_2077

Anion transporter		Selsp_2077Operon

DOOR ID: 844374		Selsp_2077,
Selsp_2078,
Selsp_2079,
Selsp_2080,
Selsp_2081,
Selsp_2082		 View Structure
19 2394816-2394989 (-)cobalamin2392382-2394620 (-)Selsp_2147

TonB-dependent receptor		Selsp_2147Operon

DOOR ID: 844392		Selsp_2141,
Selsp_2142,
Selsp_2143,
Selsp_2144,
Selsp_2145,
Selsp_2146,
Selsp_2147		 View Structure
20 2558822-2558898 (+)ZMP-ZTP2558961-2560134 (+)Selsp_2289

AICARFT/IMPCHase bienzyme (Phosphoribosylaminoimidazolecarboxamide formyltransferase) 		Selsp_2289Single gene

DOOR ID: 3121394		Selsp_2289 View Structure