Genome: Agrobacterium sp. H13-3 circular chromosome (NC_015183.1); Phylum: Alphaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 70799-71023 (+)cobalamin71278-71500 (+)nrdH

Glutaredoxin protein		AGROH133_02897Operon

DOOR ID: 818981		AGROH133_02897 (nrdH),
AGROH133_02898 (nrdI),
AGROH133_02899 (nrdE),
AGROH133_02901 (nrdF)		 View Structure
2 425838-425916 (-)sam-alpha424610-425795 (-)metZ

O-succinylhomoserine sulfhydrylase (OSH sulfhydrylase) (OSHS sulfhydrylase) 		AGROH133_03713Single gene

DOOR ID: 3075499		AGROH133_03713 (metZ) View Structure
3 830609-830834 (+)cobalamin830999-831182 (+)AGROH133_04650

AGROH133_04650Operon

DOOR ID: 819133		AGROH133_04650,
AGROH133_04652		 View Structure
4 1368389-1368476 (-)glycine1367094-1368234 (-)gcvT

Glycine cleavage system protein T2		AGROH133_05987Operon

DOOR ID: 819235		AGROH133_05985 (gcvP),
AGROH133_05986 (gcvH),
AGROH133_05987 (gcvT)		 View Structure
5 1441272-1441350 (-)sam-alpha1440190-1441231 (+)AGROH133_06158

Integrase family protein		AGROH133_06158Single gene

DOOR ID: 3075964		AGROH133_06158 View Structure
6 1601038-1601224 (-)cobalamin1600223-1600940 (-)AGROH133_06517

Nitroreductase		AGROH133_06517Single gene

DOOR ID: 3076043		AGROH133_06517 View Structure
7 2521558-2521669 (-)TPP2519639-2521466 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		AGROH133_08712Operon

DOOR ID: 819451		AGROH133_08707 (modE),
AGROH133_08708,
AGROH133_08709 (thiG),
AGROH133_08710 (thiS),
AGROH133_08711 (thiO),
AGROH133_08712 (thiC)		 View Structure
8 2682161-2682271 (-)TPP2681109-2682123 (-)tbpA

Thiamine transporter substrate binding subunit		AGROH133_09078Operon

DOOR ID: 819481		AGROH133_09062,
AGROH133_09063 (thiQ),
AGROH133_09064 (thiP),
AGROH133_09078 (tbpA)		 View Structure
9 2685376-2685452 (+)sam-alpha2685534-2686461 (+)metA

Homoserine O-acetyltransferase (HAT) (1) (Homoserine transacetylase) (HTA)		AGROH133_09083Operon

DOOR ID: 819483		AGROH133_09083 (metA),
AGROH133_09084 (galM)		 View Structure
10 2792322-2792537 (-)cobalamin2791780-2792167 (-)AGROH133_09259

AGROH133_09259Operon

DOOR ID: 819501		AGROH133_09252 (cobJ),
AGROH133_09254 (cobI),
AGROH133_09255 (cobH),
AGROH133_09256 (cobG),
AGROH133_09257 (cobN),
AGROH133_09258 (cobW),
AGROH133_09259		 View Structure