Genome: Syntrophobotulus glycolicus DSM 8271 (NC_015172.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 20418-20507 (-)c-di-GMP-I19586-20006 (-)Sgly_0019

RNA polymerase; sigma-24 subunit; ECF subfamily		Sgly_0019single gene

DOOR ID: 3070564		Sgly_0019 View Structure
2 487564-487712 (+)glmS487874-489698 (+)Sgly_0487

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		Sgly_0487Single gene

DOOR ID: 3070697		Sgly_0487 View Structure
3 773462-773569 (+)ykkC-yxkD773632-774370 (+)Sgly_0805

Urea carboxylase-associated protein 2		Sgly_0805Operon

DOOR ID: 816660		Sgly_0805,
Sgly_0806,
Sgly_0807,
Sgly_0808		 View Structure
4 827294-827375 (+)ZMP-ZTP827480-828371 (+)Sgly_0850

Filamentation induced by cAMP protein Fic		Sgly_0850Single gene

DOOR ID: 3070770		Sgly_0850 View Structure
5 829966-830072 (+)c-di-GMP-I830274-831705 (+)Sgly_0852

Signal transduction histidine kinase regulating citrate/malate metabolism		Sgly_0852operon

DOOR ID: 816666		Sgly_0852,
Sgly_0853,
Sgly_0854,
Sgly_0855		 View Structure
6 1070289-1070372 (+)c-di-GMP-I1070521-1070761 (-)Sgly_1073

Uncharacterized protein		Sgly_1073single gene

DOOR ID: 3070831		Sgly_1073 View Structure
7 1328545-1328727 (+)cobalamin1328969-1329872 (+)Sgly_1337

Sirohydrochlorin cobaltochelatase 		Sgly_1337Single gene

DOOR ID: 3070913		Sgly_1337 View Structure
8 1413365-1413451 (+)ykkC-yxkD1415523-1416672 (+)Sgly_1411

Diguanylate cyclase		Sgly_1411Operon

DOOR ID: 816787		Sgly_1411,
Sgly_1412		 View Structure
9 1516492-1516575 (+)c-di-GMP-I1516688-1518215 (+)Sgly_1501

Cell wall binding repeat 2-containing protein		Sgly_1501single gene

DOOR ID: 3070966		Sgly_1501 View Structure
10 1602977-1603065 (+)Nico1603148-1604027 (+)Sgly_1581

Cation diffusion facilitator family transporter		Sgly_1581Single gene

DOOR ID: 3070997		Sgly_1581 View Structure
11 1609417-1609551 (-)ydaO-yuaA1607485-1609309 (-)Sgly_1585

Amino acid/polyamine/organocation transporter; APC superfamily		Sgly_1585Single gene

DOOR ID: 3071001		Sgly_1585 View Structure
12 1642294-1642369 (-)c-di-GMP-I1640732-1642277 (-)Sgly_1611

Glycoside hydrolase family 5		Sgly_1611single gene

DOOR ID: 3071013		Sgly_1611 View Structure
13 1642403-1642478 (-)c-di-GMP-I1640732-1642277 (-)Sgly_1611

Glycoside hydrolase family 5		Sgly_1611single gene

DOOR ID: 3071013		Sgly_1611 View Structure
14 1686850-1686954 (+)TPP1687015-1687789 (+)Sgly_1653

Thiazole synthase (0)		Sgly_1653Operon

DOOR ID: 816837		Sgly_1653,
Sgly_1654,
Sgly_1655,
Sgly_1656,
Sgly_1657,
Sgly_1658		 View Structure
15 1825139-1825253 (+)FMN1825257-1826454 (+)Sgly_1798

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		Sgly_1798Operon

DOOR ID: 816865		Sgly_1798,
Sgly_1799,
Sgly_1800,
Sgly_1801,
Sgly_1802		 View Structure
16 1884522-1884692 (-)lysine1883183-1884437 (-)Sgly_1852

Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (0)		Sgly_1852Single gene

DOOR ID: 3071097		Sgly_1852 View Structure
17 2421807-2421967 (-)ykoK2420475-2421729 (-)Sgly_2380

MgtE intracellular region		Sgly_2380Operon

DOOR ID: 816998		Sgly_2379,
Sgly_2380		 View Structure
18 2429487-2429568 (+)ZMP-ZTP2429616-2431842 (+)Sgly_2390

Formate acetyltransferase (4)		Sgly_2390Operon

DOOR ID: 817001		Sgly_2390,
Sgly_2391		 View Structure
19 2448359-2448465 (-)ykkC-yxkD2447980-2448301 (-)Sgly_2404

Small multidrug resistance protein		Sgly_2404Single gene

DOOR ID: 3071247		Sgly_2404 View Structure
20 2815508-2815609 (+)SAM2816864-2818013 (+)Sgly_2785

Cystathionine beta-lyase 		Sgly_2785Operon

DOOR ID: 817084		Sgly_2784,
Sgly_2785		 View Structure
21 2941214-2941409 (-)cobalamin2940020-2941091 (-)Sgly_2903

Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) (1) (N(1)-alpha-phosphoribosyltransferase)		Sgly_2903Operon

DOOR ID: 817103		Sgly_2879,
Sgly_2880,
Sgly_2881,
Sgly_2882,
Sgly_2883,
Sgly_2884,
Sgly_2885,
Sgly_2886,
Sgly_2887,
Sgly_2888,
Sgly_2889,
Sgly_2890,
Sgly_2891,
Sgly_2892,
Sgly_2893,
Sgly_2894,
Sgly_2895,
Sgly_2896,
Sgly_2897,
Sgly_2898,
Sgly_2899,
Sgly_2900,
Sgly_2901,
Sgly_2902,
Sgly_2903		 View Structure
22 3108266-3108357 (+)c-di-GMP-I3108474-3110457 (-)Sgly_3056

Xenobiotic-transporting ATPase		Sgly_3056operon

DOOR ID: 817126		Sgly_3056,
Sgly_3057,
Sgly_3058		 View Structure
23 3225704-3225788 (-)c-di-GMP-I3224423-3225509 (-)Sgly_3188

Metal dependent phosphohydrolase		Sgly_3188single gene

DOOR ID: 3071445		Sgly_3188 View Structure
24 3299476-3299572 (-)glycine3298396-3298942 (-)Sgly_3258

Ribosome hibernation promoting factor (HPF)		Sgly_3258Single gene

DOOR ID: 3071475		Sgly_3258 View Structure
25 3349353-3349441 (-)c-di-GMP-I3347149-3349273 (-)Sgly_3311

Diguanylate cyclase and metal dependent phosphohydrolase		Sgly_3311operon

DOOR ID: 817173		Sgly_3310,
Sgly_3311		 View Structure