Genome: Acidovorax avenae subsp. avenae ATCC 19860 (NC_015138.1); Phylum: Betaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 105405-105679 (+)cobalamin105769-106651 (+)Acav_0088

Precorrin-4 C11-methyltransferase (33)
Acav_0088Operon

DOOR ID: 809855
Acav_0088,
Acav_0089,
Acav_0090,
Acav_0091,
Acav_0092,
Acav_0093,
Acav_0094,
Acav_0095,
Acav_0096,
Acav_0097,
Acav_0098
View Structure
2 292793-292907 (+)SAH292936-295660 (+)Acav_0266

Methionine synthase (3) (5-methyltetrahydrofolate--homocysteine methyltransferase)
Acav_0266Single gene

DOOR ID: 3060556
Acav_0266 View Structure
3 834938-835064 (+)TPP835227-837069 (+)Acav_0760

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Acav_0760Single gene

DOOR ID: 3060724
Acav_0760 View Structure
4 1757861-1758125 (+)cobalamin1760077-1761523 (+)Acav_1578

CobB/CobQ domain protein glutamine amidotransferase
Acav_1578Operon

DOOR ID: 810169
Acav_1577,
Acav_1578,
Acav_1579,
Acav_1580,
Acav_1581,
Acav_1582
View Structure
5 2364339-2364468 (-)glycine2363144-2364281 (-)Acav_2117

Glycine cleavage system T protein (0)
Acav_2117Operon

DOOR ID: 810281
Acav_2116,
Acav_2117
View Structure
6 2364488-2364586 (-)glycine2363144-2364281 (-)Acav_2117

Glycine cleavage system T protein (0)
Acav_2117Operon

DOOR ID: 810281
Acav_2116,
Acav_2117
View Structure
7 2473690-2473789 (-)TPP2472499-2473618 (-)Acav_2214

FAD dependent oxidoreductase
Acav_2214Operon

DOOR ID: 810304
Acav_2213,
Acav_2214
View Structure
8 2528890-2529073 (+)FMN2529220-2529922 (+)Acav_2268

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
Acav_2268Single gene

DOOR ID: 3061212
Acav_2268 View Structure
9 2574751-2574909 (-)ZMP-ZTP2573467-2574712 (-)Acav_2305

Serine hydroxymethyltransferase (SHMT) (Serine methylase)
Acav_2305Operon

DOOR ID: 810325
Acav_2304,
Acav_2305
View Structure
10 4548432-4548526 (-)SAH4546934-4548362 (-)Acav_3976

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
Acav_3976Single gene

DOOR ID: 3061844
Acav_3976 View Structure
11 5036669-5036778 (+)glycine5036864-5038184 (+)Acav_4410

D-amino-acid dehydrogenase
Acav_4410Single gene

DOOR ID: 3061989
Acav_4410 View Structure
12 5049604-5049695 (-)TPP5048416-5049511 (-)Acav_4421

Acyl-protein synthetase LuxE
Acav_4421Operon

DOOR ID: 810756
Acav_4418,
Acav_4419,
Acav_4420,
Acav_4421
View Structure
13 5463762-5463944 (-)yybP-ykoY5463160-5463739 (-)Acav_4771

Acav_4771Single gene

DOOR ID: 3062120
Acav_4771 View Structure