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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
606026-606208
(-)
ydaO-yuaA
605369-606023 (-)
HMPREF0733_10548
NlpC/P60 family protein
HMPREF0733_10548
Single gene
DOOR ID:
2974214
HMPREF0733_10548
View Structure
2
1124590-1124698
(-)
SAM
1121236-1123558 (-)
metE
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4)
HMPREF0733_11051
Operon
DOOR ID:
762816
HMPREF0733_11051
(metE)
,
HMPREF0733_11052
(metF)
View Structure
3
1239781-1239897
(-)
SAM
1235702-1237454 (+)
albF
Drug resistance MFS transporter; drug:H+ antiporter-2 family
HMPREF0733_11148
Single gene
DOOR ID:
2974484
HMPREF0733_11148
(albF)
View Structure
4
1247739-1247822
(-)
SAM
1246921-1247734 (-)
ntrD
ABC transporter; ATP-binding protein
HMPREF0733_11157
Single gene
DOOR ID:
2974487
View Structure
5
1247990-1248099
(+)
SAM-IV
1248202-1249630 (+)
HMPREF0733_11158
FMN-dependent oxidoreductase; nitrilotriacetate monooxygenase family
HMPREF0733_11158
Single gene
DOOR ID:
2974488
HMPREF0733_11158
View Structure
6
1431917-1432019
(+)
TPP
1432045-1432675 (+)
HMPREF0733_11316
HMPREF0733_11316
Single gene
DOOR ID:
2974577
HMPREF0733_11316
View Structure
7
1465339-1465467
(+)
SAM-IV
1465499-1465724 (+)
HMPREF0733_11343
HMPREF0733_11343
Operon
DOOR ID:
762876
HMPREF0733_11343,
HMPREF0733_11344
View Structure
8
1664623-1664736
(+)
SAM-IV
1664845-1666192 (+)
metY2
O-acetylhomoserine aminocarboxypropyltransferase (9)
HMPREF0733_11516
Operon
DOOR ID:
762911
HMPREF0733_11516
(metY2)
,
HMPREF0733_11517
(metX)
View Structure
9
2009644-2009783
(+)
FMN
2009906-2010626 (+)
HMPREF0733_11813
Nicotinamide mononucleotide transporter PnuC
HMPREF0733_11813
Operon
DOOR ID:
762977
HMPREF0733_11813,
HMPREF0733_11814
(ribD)
,
HMPREF0733_11815
(ribBA)
,
HMPREF0733_11816
(ribA)
View Structure
10
2057234-2057358
(+)
TPP
2057458-2059102 (+)
thiD
Phosphomethylpyrimidine kinase
HMPREF0733_11853
Single gene
DOOR ID:
2974823
HMPREF0733_11853
(thiD)
View Structure
Genome:
Rothia dentocariosa ATCC 17931
(
NC_014643.1
);
Phylum:
Actinobacteria
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