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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
374106-374212
(-)
TPP
373420-374047 (-)
Mesil_0370
Thiamine-phosphate synthase (TP synthase) (TPS) (Thiamine-phosphate pyrophosphorylase) (TMP pyrophosphorylase) (TMP-PPase)
Mesil_0370
Operon
DOOR ID:
709274
Mesil_0367,
Mesil_0368,
Mesil_0369,
Mesil_0370
View Structure
2
805173-805306
(-)
FMN
804059-805025 (-)
Mesil_0815
NMT1/THI5 like domain protein
Mesil_0815
Single gene
DOOR ID:
2867153
Mesil_0815
View Structure
3
876304-876416
(+)
TPP
876444-877530 (+)
Mesil_0885
ABC transporter; periplasmic binding protein; thiB subfamily
Mesil_0885
Operon
DOOR ID:
709374
Mesil_0885,
Mesil_0886
View Structure
4
1984360-1984496
(-)
SAM
1982843-1984148 (-)
Mesil_1988
O-acetylhomoserine/O-acetylserine sulfhydrylase (9)
Mesil_1988
Operon
DOOR ID:
709576
Mesil_1987,
Mesil_1988
View Structure
5
2809184-2809267
(+)
fluoride
2809309-2810494 (+)
Mesil_2766
Sodium/hydrogen exchanger
Mesil_2766
Single gene
DOOR ID:
2867850
Mesil_2766
View Structure
6
3024724-3024809
(-)
c-di-GMP-II
3023170-3024691 (-)
Mesil_2977
Peptidase S8 and S53 subtilisin kexin sedolisin
Mesil_2977
Single gene
DOOR ID:
2867911
Mesil_2977
View Structure
7
3125025-3125217
(-)
cobalamin
3124030-3124906 (-)
Mesil_3079
Periplasmic binding protein
Mesil_3079
Operon
DOOR ID:
709801
Mesil_3075,
Mesil_3076,
Mesil_3077,
Mesil_3078,
Mesil_3079
View Structure
8
3203306-3203459
(-)
SAM
3202001-3203258 (-)
Mesil_3154
O-acetylhomoserineaminocarboxypropyltransferase (9)
Mesil_3154
Operon
DOOR ID:
709813
Mesil_3152,
Mesil_3153,
Mesil_3154
View Structure
Genome:
Meiothermus silvanus DSM 9946
(
NC_014212.1
);
Phylum:
Deinococcus-Thermus
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