RiboswitchDB

Genome: Sphingobium japonicum UT26S chromosome I (NC_014006.1); Phylum: Alphaproteobacteria

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

262326-262446 (-)

yybP-ykoY

260500-261439 (-)

NDUFA9

NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex 9

Single gene

DOOR ID: 2815535

SJA_C1-02440 (NDUFA9)

2

2785201-2785300 (-)

glycine

2783870-2785040 (-)

gcvT

Aminomethyltransferase (0)

Operon

DOOR ID: 683177

SJA_C1-27810 (gcvH),
SJA_C1-27820 (gcvT)

3

2850207-2850421 (-)

cobalamin

2848214-2850035 (-)

SJA_C1-28500

Outer membrane cobalamin receptor protein

Single gene

DOOR ID: 2816374

SJA_C1-28500

4

3354682-3354773 (-)

TPP

3354205-3354613 (-)

SJA_C1-33690

Operon

DOOR ID: 683319

SJA_C1-33670,
SJA_C1-33680 (thiC),
SJA_C1-33690

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";}}