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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
302562-302662
(-)
TPP
300537-302472 (-)
thiC
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
EAMY_0252
Operon
DOOR ID:
679907
EAMY_0250,
EAMY_0251
(thiE)
,
EAMY_0252
(thiC)
View Structure
2
496041-496189
(+)
FMN
496296-496953 (+)
ribB
3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
EAMY_0429
Operon
DOOR ID:
679943
EAMY_0428,
EAMY_0429
(ribB)
View Structure
3
979087-979157
(+)
fluoride
979239-979617 (+)
crcB
Putative fluoride ion transporter CrcB
EAMY_0892
Single gene
DOOR ID:
2810199
EAMY_0892
(crcB)
View Structure
4
1287916-1288050
(+)
MOCO
1289042-1289558 (+)
moaB
Molybdenum cofactor biosynthesis protein B
EAMY_1214
Operon
DOOR ID:
680107
EAMY_1213
(moaA)
,
EAMY_1214
(moaB)
,
EAMY_1215
(moaC)
,
EAMY_1216
(moaD)
,
EAMY_1217
(moaE)
,
EAMY_1218
(yaiW)
View Structure
5
2207937-2208039
(+)
TPP
2208095-2208284 (+)
EAMY_2166
EAMY_2166
Single gene
DOOR ID:
2810755
EAMY_2166
View Structure
6
2323645-2323746
(-)
TPP
2322818-2323610 (-)
thiM
Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
EAMY_2273
Operon
DOOR ID:
680303
EAMY_2272
(thiD)
,
EAMY_2273
(thiM)
View Structure
7
3006499-3006594
(+)
TPP
3006632-3007619 (+)
thiB
Thiamine ABC transport system; periplasmic component
EAMY_2915
Operon
DOOR ID:
680433
EAMY_2915
(thiB)
,
EAMY_2916
(thiP)
,
EAMY_2917
(thiQ)
View Structure
8
3448720-3448909
(+)
lysine
3449003-3450356 (+)
lysC
Aspartokinase
EAMY_3339
Single gene
DOOR ID:
2811210
EAMY_3339
(lysC)
View Structure
Genome:
Erwinia amylovora CFBP1430
(
NC_013961.1
);
Phylum:
Gammaproteobacteria
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