Genome: Comamonas testosteroni CNB-2 (NC_013446.2); Phylum: Betaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 140996-141105 (+)SAH141177-143901 (+)CtCNB1_0126

Methionine synthase (3) (5-methyltetrahydrofolate--homocysteine methyltransferase)
CtCNB1_0126Single gene

DOOR ID: 2718549
CtCNB1_0126 View Structure
2 597104-597201 (+)SAH597276-598707 (+)CtCNB1_0535

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
CtCNB1_0535Single gene

DOOR ID: 2718710
CtCNB1_0535 View Structure
3 1075144-1075243 (-)glycine1073703-1074972 (-)CtCNB1_0952

FAD dependent oxidoreductase
CtCNB1_0952Operon

DOOR ID: 632551
CtCNB1_0951,
CtCNB1_0952
View Structure
4 2085093-2085335 (+)cobalamin2085576-2087280 (+)CtCNB1_1842

TonB-dependent receptor
CtCNB1_1842Operon

DOOR ID: 632727
CtCNB1_1842,
CtCNB1_1843
View Structure
5 2121094-2121334 (-)cobalamin2119624-2120965 (-)CtCNB1_1878

Nitrite/sulfite reductase; hemoprotein
CtCNB1_1878Operon

DOOR ID: 632734
CtCNB1_1875,
CtCNB1_1876,
CtCNB1_1877,
CtCNB1_1878
View Structure
6 2134574-2134817 (-)cobalamin2132285-2134451 (-)CtCNB1_1887

TonB-dependent siderophore receptor
CtCNB1_1887Operon

DOOR ID: 632736
CtCNB1_1882,
CtCNB1_1883,
CtCNB1_1884,
CtCNB1_1885,
CtCNB1_1886,
CtCNB1_1887
View Structure
7 2340358-2340449 (+)TPP2340519-2341614 (+)CtCNB1_2063

Putative acyl protein synthase/acyl-CoA
CtCNB1_2063Single gene

DOOR ID: 2719354
CtCNB1_2063 View Structure
8 2478840-2478965 (-)glycine2477638-2478775 (-)CtCNB1_2173

Glycine cleavage system T protein
CtCNB1_2173Operon

DOOR ID: 632796
CtCNB1_2171,
CtCNB1_2172,
CtCNB1_2173
View Structure
9 2478985-2479095 (-)glycine2477638-2478775 (-)CtCNB1_2173

Glycine cleavage system T protein
CtCNB1_2173Operon

DOOR ID: 632796
CtCNB1_2171,
CtCNB1_2172,
CtCNB1_2173
View Structure
10 2841218-2841381 (+)yybP-ykoY2841447-2841957 (+)CtCNB1_2477

Putative manganese efflux pump MntP
CtCNB1_2477Single gene

DOOR ID: 2719556
CtCNB1_2477 View Structure
11 3376588-3376721 (+)TPP3376799-3378092 (+)CtCNB1_2972

Cytosine/purines/uracil permease
CtCNB1_2972Single gene

DOOR ID: 2719809
CtCNB1_2972 View Structure
12 3380527-3380688 (+)TPP3380751-3381846 (+)CtCNB1_2976

FAD dependent oxidoreductase
CtCNB1_2976Single gene

DOOR ID: 2719813
CtCNB1_2976 View Structure
13 3583697-3583789 (+)glycine3583974-3584640 (+)CtCNB1_3167

Putative membrane protein
CtCNB1_3167Single gene

DOOR ID: 2719901
CtCNB1_3167 View Structure
14 3583803-3583922 (+)glycine3583974-3584640 (+)CtCNB1_3167

Putative membrane protein
CtCNB1_3167Single gene

DOOR ID: 2719901
CtCNB1_3167 View Structure
15 3676657-3676811 (+)ZMP-ZTP3676846-3678094 (+)CtCNB1_3240

Serine hydroxymethyltransferase (SHMT) (Serine methylase)
CtCNB1_3240Operon

DOOR ID: 632994
CtCNB1_3240,
CtCNB1_3241
View Structure
16 3935612-3935729 (-)TPP3933408-3935382 (-)CtCNB1_3480

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
CtCNB1_3480Single gene

DOOR ID: 2720054
CtCNB1_3480 View Structure
17 4077494-4077662 (-)FMN4076860-4077403 (-)CtCNB1_3621

6;7-dimethyl-8-ribityllumazine synthase (DMRL synthase) (LS) (Lumazine synthase) (8)
CtCNB1_3621Single gene

DOOR ID: 2720115
CtCNB1_3621 View Structure
18 5274129-5274270 (-)yybP-ykoY5273480-5274092 (-)CtCNB1_4718

Transmembrane protein PFT27
CtCNB1_4718Single gene

DOOR ID: 2720631
CtCNB1_4718 View Structure