Genome: Gordonia bronchialis DSM 43247 (NC_013441.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 712368-712481 (-)TPP709801-710674 (-)Gbro_0649

Phosphomethylpyrimidine kinase
Gbro_0649Operon

DOOR ID: 631431
Gbro_0648,
Gbro_0649,
Gbro_0650
View Structure
2 1286864-1287046 (-)ydaO-yuaA1286221-1286857 (-)Gbro_1231

Transglycosylase domain protein
Gbro_1231Single gene

DOOR ID: 2717307
Gbro_1231 View Structure
3 1723205-1723355 (+)cobalamin1723394-1724429 (+)Gbro_1651

Periplasmic binding protein
Gbro_1651Operon

DOOR ID: 631640
Gbro_1651,
Gbro_1652,
Gbro_1653
View Structure
4 1839239-1839356 (-)SAM-IV1837850-1839176 (-)Gbro_1761

O-acetylhomoserine/O-acetylserine sulfhydrylase (9)
Gbro_1761Operon

DOOR ID: 631667
Gbro_1760,
Gbro_1761
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5 1883137-1883210 (+)cobalamin1883216-1883507 (+)Gbro_1803

Gbro_1803Operon

DOOR ID: 631677
Gbro_1803,
Gbro_1804,
Gbro_1805
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6 2505001-2505159 (+)FMN2505204-2505852 (+)Gbro_2354

Riboflavin synthase; alpha subunit
Gbro_2354Operon

DOOR ID: 631810
Gbro_2354,
Gbro_2355,
Gbro_2356,
Gbro_2357,
Gbro_2358,
Gbro_2359,
Gbro_2360,
Gbro_2361,
Gbro_2362
View Structure
7 2617540-2617604 (-)ykkC-III2617214-2617529 (-)Gbro_2448

Gbro_2448single gene

DOOR ID: 2717661
Gbro_2448 View Structure
8 2957847-2957952 (-)glycine2954752-2957635 (-)Gbro_2769

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))
Gbro_2769Single gene

DOOR ID: 2717783
Gbro_2769 View Structure
9 3265707-3265918 (-)ydaO-yuaA3265006-3265690 (-)Gbro_3050

NLP/P60 protein
Gbro_3050Single gene

DOOR ID: 2717868
Gbro_3050 View Structure
10 3683245-3683321 (-)fluoride3682736-3683225 (-)Gbro_3466

Putative fluoride ion transporter CrcB
Gbro_3466Operon

DOOR ID: 632047
Gbro_3464,
Gbro_3465,
Gbro_3466
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11 4695324-4695428 (-)TPP4694044-4694242 (-)Gbro_4389

Thiamine biosynthesis protein ThiS
Gbro_4389Operon

DOOR ID: 632255
Gbro_4386,
Gbro_4387,
Gbro_4388,
Gbro_4389,
Gbro_4390
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12 4924047-4924144 (+)TPP4925013-4926666 (-)Gbro_4595

Carboxylesterase type B
Gbro_4595Operon

DOOR ID: 632294
Gbro_4595,
Gbro_4596
View Structure