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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
434511-434586
(+)
SAH
434627-436040 (+)
Hneap_0414
Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
Hneap_0414
Operon
DOOR ID:
629455
Hneap_0414,
Hneap_0415
View Structure
2
533716-533822
(+)
TPP
533870-535760 (+)
Hneap_0500
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Hneap_0500
Single gene
DOOR ID:
2713665
Hneap_0500
View Structure
3
559859-560011
(-)
cobalamin
557966-559820 (-)
Hneap_0521
TonB-dependent receptor
Hneap_0521
Single gene
DOOR ID:
2713672
Hneap_0521
View Structure
4
1928661-1928728
(-)
fluoride
1927673-1928618 (-)
Hneap_1793
Respiratory-chain NADH dehydrogenase subunit 1
Hneap_1793
Single gene
DOOR ID:
2713999
Hneap_1793
View Structure
Genome:
Halothiobacillus neapolitanus c2
(
NC_013422.1
);
Phylum:
Gammaproteobacteria
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