RiboswitchDB

Genome: Cyanothece sp. PCC 8802 (NC_013161.1); Phylum: Cyanobacteria/Melainabacteria group

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

2146163-2146320 (+)

cobalamin

2146352-2147018 (+)

Cyan8802_2139

Single gene

DOOR ID: 2667573

Cyan8802_2139

2

3362367-3362523 (-)

ydaO-yuaA

3360502-3361837 (-)

Cyan8802_3289

Single gene

DOOR ID: 2668136

Cyan8802_3289

3

3514995-3515092 (-)

TPP

3513602-3514985 (-)

Cyan8802_3442

Single gene

DOOR ID: 2668202

Cyan8802_3442

4

3816564-3816693 (+)

ydaO-yuaA

3816789-3817632 (+)

Cyan8802_3729

Operon

DOOR ID: 606517

Cyan8802_3729,
Cyan8802_3730,
Cyan8802_3731

5

4551136-4551201 (-)

glutamine

4550943-4551099 (-)

Cyan8802_4410

Operon

DOOR ID: 606633

Cyan8802_4409,
Cyan8802_4410

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