Genome: Chitinophaga pinensis DSM 2588 (NC_013132.1); Phylum: Bacteroidetes/Chlorobi group
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 757635-757743 (+)TPP757827-758031 (+)Cpin_0620

Thiamine biosynthesis protein ThiS
Cpin_0620Single gene

DOOR ID: 2660086
Cpin_0620 View Structure
2 2395847-2395966 (-)SAM2394511-2395690 (-)Cpin_1963

Cystathionine gamma-lyase
Cpin_1963Single gene

DOOR ID: 2660676
Cpin_1963 View Structure
3 3865219-3865412 (-)cobalamin3862618-3864949 (-)Cpin_3133

TonB-dependent siderophore receptor
Cpin_3133Operon

DOOR ID: 603354
Cpin_3132,
Cpin_3133
View Structure
4 4896479-4896690 (+)cobalamin4896851-4897904 (+)Cpin_3940

Cpin_3940Single gene

DOOR ID: 2661554
Cpin_3940 View Structure
5 4958750-4958860 (+)SAM4959024-4960197 (+)Cpin_3986

Cystathionine gamma-lyase
Cpin_3986Operon

DOOR ID: 603505
Cpin_3986,
Cpin_3987,
Cpin_3988
View Structure
6 4998418-4998502 (+)fluoride4999869-5000823 (+)Cpin_4019

Alcohol dehydrogenase GroES domain protein
Cpin_4019Operon

DOOR ID: 603511
Cpin_4018,
Cpin_4019
View Structure
7 5051725-5051830 (+)TPP5052060-5053338 (+)Cpin_4062

Sodium/hydrogen exchanger
Cpin_4062Single gene

DOOR ID: 2661620
Cpin_4062 View Structure
8 5561903-5562104 (+)cobalamin5562246-5562612 (+)Cpin_4470

Cpin_4470Operon

DOOR ID: 603594
Cpin_4470,
Cpin_4471,
Cpin_4472,
Cpin_4473,
Cpin_4474,
Cpin_4475,
Cpin_4476,
Cpin_4477,
Cpin_4478,
Cpin_4479,
Cpin_4480,
Cpin_4481
View Structure
9 7652526-7652719 (+)cobalamin7653104-7654250 (+)Cpin_6055

Cpin_6055Single gene

DOOR ID: 2662566
Cpin_6055 View Structure
10 8141141-8141352 (+)cobalamin8141510-8143820 (+)Cpin_6481

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)
Cpin_6481Single gene

DOOR ID: 2662785
Cpin_6481 View Structure
11 8209890-8209982 (+)TPP8210044-8212420 (+)Cpin_6547

TonB-dependent receptor
Cpin_6547Operon

DOOR ID: 603970
Cpin_6547,
Cpin_6548,
Cpin_6549
View Structure