Genome: Pedobacter heparinus DSM 2366 (NC_013061.1); Phylum: Bacteroidetes/Chlorobi group
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 145025-145156 (-)TPP141892-142525 (-)Phep_0119

Thiamine-phosphate diphosphorylase
Phep_0119Operon

DOOR ID: 597122
Phep_0118,
Phep_0119,
Phep_0120
View Structure
2 2169002-2169115 (-)SAM2167470-2168775 (-)Phep_1875

O-acetylhomoserine/O-acetylserine sulfhydrylase (9)
Phep_1875Operon

DOOR ID: 597505
Phep_1873,
Phep_1874,
Phep_1875
View Structure
3 2218118-2218319 (+)cobalamin2218414-2220478 (+)Phep_1918

TonB-dependent receptor
Phep_1918Operon

DOOR ID: 597516
Phep_1918,
Phep_1919,
Phep_1920,
Phep_1921,
Phep_1922
View Structure
4 2860062-2860149 (+)TPP2860221-2860422 (+)Phep_2465

Thiamine biosynthesis protein ThiS
Phep_2465Single gene

DOOR ID: 2649461
Phep_2465 View Structure
5 4562963-4563072 (+)SAM4563187-4566847 (+)Phep_3799

Methionine synthase (3) (5-methyltetrahydrofolate--homocysteine methyltransferase)
Phep_3799Operon

DOOR ID: 597900
Phep_3799,
Phep_3800
View Structure