Genome: Escherichia coli BL21(DE3) (NC_012892.2); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 78316-78415 (-)TPP77301-78285 (-)tbpA


DOOR ID: 580548
B21_00067 (thiQ),
B21_00068 (thiP),
B21_00069 (tbpA),
B21_00070 (sgrR)
View Structure
2 800899-801043 (+)MOCO802041-802554 (+)moaB


DOOR ID: 580692
B21_00765 (moaA),
B21_00766 (moaB),
B21_00767 (moaC),
B21_00768 (moaD),
B21_00769 (moaE),
B21_00770 (ybhL)
View Structure
3 1851177-1851278 (+)yybP-ykoY1851408-1851975 (+)yebN

B21_01779Single gene

DOOR ID: 2613606
B21_01779 (yebN) View Structure
4 2083125-2083221 (-)TPP2082301-2083090 (-)thiM


DOOR ID: 580957
B21_01993 (yegW),
B21_01994 (yegX),
B21_01995 (thiD),
B21_01996 (thiM)
View Structure
5 3052001-3052149 (-)FMN3051243-3051897 (-)ribB

B21_02863Single gene

DOOR ID: 2613783
B21_02863 (ribB) View Structure
6 4104225-4104325 (-)TPP4102248-4104144 (-)thiC


DOOR ID: 581356
B21_03819 (thiH),
B21_03820 (thiG),
B21_03821 (thiS),
B21_03822 (thiF),
B21_03823 (thiE),
B21_03824 (thiC)
View Structure
7 4140690-4140886 (-)lysine4139248-4140598 (-)lysC

B21_03856Single gene

DOOR ID: 2613980
B21_03856 (lysC) View Structure
8 4283881-4283927 (+)mini-ykkC4283944-4284262 (+)sugE


DOOR ID: 581388
B21_03979 (efp),
B21_03980 (ecnA),
B21_03981 (ecnB),
B21_03982 (sugE)
View Structure
9 4379052-4379167 (+)Mg sensor4379260-4381957 (+)mgtA

B21_04074Single gene

DOOR ID: 2614028
B21_04074 (mgtA) View Structure