Genome: Vibrio cholerae MJ-1236 chromosome I (NC_012668.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 225633-225810 (+)lysine225920-227276 (+)VCD_001232

VCD_001232Single gene

DOOR ID: 2571213
VCD_001232 View Structure
2 530411-530520 (+)yybP-ykoY530612-531167 (+)VCD_001490

VCD_001490Single gene

DOOR ID: 2571294
VCD_001490 View Structure
3 570120-570218 (+)TPP570318-572256 (+)VCD_001529

VCD_001529Operon

DOOR ID: 558803
VCD_001529,
VCD_001530 (thiE),
VCD_001531,
VCD_001532,
VCD_001533 (thiG),
VCD_001534 (thiH)
View Structure
4 655448-655651 (+)cobalamin655694-657530 (+)VCD_001612

VCD_001612Single gene

DOOR ID: 2571346
VCD_001612 View Structure
5 872126-872263 (+)TPP872326-873319 (+)tbpA

VCD_001821Operon

DOOR ID: 558857
VCD_001821 (tbpA),
VCD_001822 (thiP),
VCD_001823
View Structure
6 1806459-1806545 (-)c-di-GMP-I1805757-1806345 (-)VCD_002657

VCD_002657single gene

DOOR ID: 2571740
VCD_002657 View Structure
7 1880368-1880537 (-)ykoK1878912-1880268 (-)VCD_002723

VCD_002723Single gene

DOOR ID: 2571769
VCD_002723 View Structure
8 2123546-2123645 (+)glycine2123737-2125114 (+)VCD_002925

VCD_002925Single gene

DOOR ID: 2571838
VCD_002925 View Structure
9 2159266-2159313 (-)mini-ykkC2158934-2159249 (-)VCD_002952

VCD_002952Single gene

DOOR ID: 2571848
VCD_002952 View Structure
10 2288780-2288890 (-)TPP2287871-2288720 (-)VCD_003055

VCD_003055Single gene

DOOR ID: 2571896
VCD_003055 View Structure
11 2464649-2464831 (-)lysine2462931-2464533 (-)VCD_003211

VCD_003211Single gene

DOOR ID: 2571970
VCD_003211 View Structure
12 2570644-2570783 (-)MOCO2569093-2569606 (-)VCD_003315

VCD_003315Operon

DOOR ID: 559143
VCD_003312,
VCD_003313 (moaD),
VCD_003314 (moaC),
VCD_003315,
VCD_003316 (moaA)
View Structure