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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
644028-644097
(+)
SAH
644162-645575 (+)
sahH
Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
LHK_00674
Operon
DOOR ID:
547604
LHK_00674
(sahH)
,
LHK_00675
View Structure
2
2075238-2075417
(+)
yybP-ykoY
2075423-2075999 (+)
LHK_02186
LHK_02186
Single gene
DOOR ID:
2544016
LHK_02186
View Structure
3
2131833-2132008
(+)
lysine
2132099-2133698 (+)
LHK_02247
Na+/H+ antiporter NhaC
LHK_02247
Single gene
DOOR ID:
2544039
LHK_02247
View Structure
4
2535368-2535470
(-)
TPP
2534516-2535320 (-)
thiM
Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
LHK_02662
Operon
DOOR ID:
548005
LHK_02660,
LHK_02661
(thiE)
,
LHK_02662
(thiM)
View Structure
5
2593985-2594083
(-)
glycine
2592851-2593958 (-)
gcvT
Aminomethyltransferase (0) (Glycine cleavage system T protein)
LHK_02724
Operon
DOOR ID:
548013
LHK_02723
(gcvH)
,
LHK_02724
(gcvT)
View Structure
6
2594098-2594198
(-)
glycine
2592851-2593958 (-)
gcvT
Aminomethyltransferase (0) (Glycine cleavage system T protein)
LHK_02724
Operon
DOOR ID:
548013
LHK_02723
(gcvH)
,
LHK_02724
(gcvT)
View Structure
7
3127622-3127818
(-)
cobalamin
3125642-3127511 (-)
LHK_03223
Probable outer membrane receptor protein
LHK_03223
Operon
DOOR ID:
548119
LHK_03219,
LHK_03220,
LHK_03221,
LHK_03222
(cobU)
,
LHK_03223
View Structure
Genome:
Laribacter hongkongensis HLHK9
(
NC_012559.1
);
Phylum:
Betaproteobacteria
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