RiboswitchDB

Genome: Streptococcus equi subsp. zooepidemicus (NC_012470.1); Phylum: Firmicutes

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

397388-397513 (+)

FMN

397561-398164 (+)

SZO_03420

Riboflavin transporter

Operon

DOOR ID: 539127

SZO_03420,
SZO_03430

2

1186131-1186217 (+)

glycine

1186309-1187680 (+)

SZO_10740

Sodium:alanine symporter family protein

Single gene

DOOR ID: 2526724

SZO_10740

3

1310939-1311057 (-)

preQ1-II

1308379-1310338 (-)

ligA

DNA ligase (Polydeoxyribonucleotide synthase [NAD(+)])

Operon

DOOR ID: 539308

SZO_11750,
SZO_11760,
SZO_11770 (ligA)

4

1393601-1393697 (+)

TPP

1393743-1394307 (+)

SZO_12490

Putative membrane protein

Single gene

DOOR ID: 2526788

SZO_12490

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