Genome: Rhodobacter sphaeroides KD131 chromosome II (NC_011958.1); Phylum: Alphaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 267614-267827 (-)cobalamin266875-267553 (-)RSKD131_3360

RSKD131_3360Single gene

DOOR ID: 2490999
RSKD131_3360 View Structure
2 304960-305139 (+)cobalamin305183-305876 (+)RSKD131_3398

Cob(II)yrinic acid a;c-diamide reductase
RSKD131_3398Single gene

DOOR ID: 2491008
RSKD131_3398 View Structure
3 475763-475963 (-)cobalamin474586-475591 (-)RSKD131_3558

Periplasmic binding protein
RSKD131_3558Operon

DOOR ID: 520813
RSKD131_3556,
RSKD131_3557,
RSKD131_3558
View Structure
4 703570-703619 (-)SAM-SAH702396-703554 (-)RSKD131_3766

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)
RSKD131_3766Operon

DOOR ID: 520852
RSKD131_3766,
RSKD131_3767
View Structure
5 757492-757539 (+)mini-ykkC757587-757875 (+)RSKD131_3819

RSKD131_3819Single gene

DOOR ID: 2491145
RSKD131_3819 View Structure
6 759893-759996 (-)ykkC-yxkD758972-759845 (-)RSKD131_3822

RSKD131_3822Single gene

DOOR ID: 2491148
RSKD131_3822 View Structure
7 1245602-1245790 (+)cobalamin1245873-1246257 (+)RSKD131_4280

RSKD131_4280Single gene

DOOR ID: 2491301
RSKD131_4280 View Structure
8 1250655-1250868 (-)cobalamin1249573-1250578 (-)RSKD131_4283

Cobyrinate a;c-diamide synthase / hydrogenobyrinic acid a;c-diamide synthase (Glutamine-hydrolysing)
RSKD131_4283Operon

DOOR ID: 520949
RSKD131_4281,
RSKD131_4282,
RSKD131_4283
View Structure
9 1256299-1256449 (-)cobalamin1255665-1255890 (-)RSKD131_4289

ABC transporter; periplasmic substrate-binding protein
RSKD131_4289Single gene

DOOR ID: 2491307
RSKD131_4289 View Structure