Genome: Vibrio splendidus LGP32 chromosome I (NC_011753.2); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 33236-33411 (+)yybP-ykoY33445-34000 (+)VS_0035

VS_0035Single gene

DOOR ID: 2448748
VS_0035 View Structure
2 157190-157289 (+)purine157347-158718 (+)VS_0162

VS_0162Single gene

DOOR ID: 2448796
VS_0162 View Structure
3 308011-308188 (-)lysine306533-307901 (-)VS_0316

Aspartokinase
VS_0316Single gene

DOOR ID: 2448855
VS_0316 View Structure
4 699134-699217 (-)fluoride698246-698939 (-)VS_0669

NifU-related domain containing protein
VS_0669Operon

DOOR ID: 501144
VS_0668,
VS_0669
View Structure
5 1018192-1018344 (+)MOCO1019678-1020191 (+)VS_0986

Molybdenum cofactor biosynthesis protein B
VS_0986Operon

DOOR ID: 501199
VS_0986,
VS_0987 (moaC),
VS_0988 (moaD),
VS_0989
View Structure
6 1146178-1146263 (-)c-di-GMP-I1145459-1146050 (-)VS_1087

Uncharacterized protein
VS_1087operon

DOOR ID: 501211
VS_1086,
VS_1087
View Structure
7 1389787-1389921 (-)glycine1388287-1389658 (-)VS_1291

Sodium:alanine symporter
VS_1291Single gene

DOOR ID: 2449294
VS_1291 View Structure
8 2174996-2175173 (-)lysine2173290-2174892 (-)VS_2027

VS_2027Single gene

DOOR ID: 2449626
VS_2027 View Structure
9 2847575-2847705 (+)cobalamin2847798-2848983 (+)VS_2661

Cobalt-precorrin-5B C(1)-methyltransferase (95) (Cobalt-precorrin-6A synthase)
VS_2661Operon

DOOR ID: 501503
VS_2661,
VS_2662,
VS_2663
View Structure
10 2931678-2931797 (-)TPP2930631-2931624 (-)tbpA

Thiamine-binding periplasmic protein
VS_2767Single gene

DOOR ID: 2449924
VS_2767 (tbpA) View Structure
11 3150383-3150586 (-)cobalamin3148582-3150343 (-)VS_2998

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)
VS_2998Operon

DOOR ID: 501557
VS_2996,
VS_2997,
VS_2998
View Structure
12 3244518-3244616 (-)TPP3242438-3244388 (-)VS_3098

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
VS_3098Operon

DOOR ID: 501572
VS_3093 (thiH),
VS_3094 (thiG),
VS_3095,
VS_3096,
VS_3097 (thiE),
VS_3098
View Structure