About
Search
Advanced Search
Genomes
Predict
About us
S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
516815-516883
(+)
fluoride
516904-517060 (+)
HY04AAS1_0578
HY04AAS1_0578
Operon
DOOR ID:
461503
HY04AAS1_0578,
HY04AAS1_0579
View Structure
2
523357-523442
(-)
fluoride
522965-523334 (-)
HY04AAS1_0586
Putative fluoride ion transporter CrcB
HY04AAS1_0586
Operon
DOOR ID:
461505
HY04AAS1_0582,
HY04AAS1_0583,
HY04AAS1_0584,
HY04AAS1_0585,
HY04AAS1_0586
View Structure
Genome:
Hydrogenobaculum sp. Y04AAS1
(
NC_011126.1
);
Phylum:
Aquificae
a:3:{i:0;a:18:{i:0;s:5:"S.No.";i:1;s:9:"Genome_ID";i:2;s:11:"Genome_Name";i:3;s:13:"Taxonomy_name";i:4;s:6:"Tax_ID";i:5;s:19:"Riboswitch_Location";i:6;s:17:"Riboswitch_strand";i:7;s:16:"Riboswitch_class";i:8;s:14:"Tandem_Aptamer";i:9;s:24:"Downstream_gene_location";i:10;s:11:"Gene_Strand";i:11;s:20:"Downstream_gene_name";i:12;s:24:"Gene_product_description";i:13;s:9:"Locus_tag";i:14;s:25:"Single_gene/within_operon";i:15;s:9:"Operon_ID";i:16;s:14:"Operon_details";i:17;s:22:"Biological_process[GO]";}i:1;a:19:{i:0;i:1;i:1;s:11:"NC_011126.1";i:2;s:29:"Hydrogenobaculum sp. Y04AAS1 ";i:3;s:9:"Aquificae";i:4;s:6:"187857";i:5;s:13:"516815-516883";i:6;s:1:"+";i:7;s:8:"fluoride";i:8;s:0:"";i:9;s:13:"516904-517060";i:10;s:1:"+";i:11;s:13:"HY04AAS1_0578";i:12;s:0:"";i:13;s:13:"HY04AAS1_0578";i:14;s:6:"Operon";i:15;s:6:"461503";i:16;s:27:"HY04AAS1_0578;HY04AAS1_0579";i:17;s:0:"";i:18;s:15:"View Structure ";}i:2;a:19:{i:0;i:2;i:1;s:11:"NC_011126.1";i:2;s:29:"Hydrogenobaculum sp. Y04AAS1 ";i:3;s:9:"Aquificae";i:4;s:6:"187857";i:5;s:13:"523357-523442";i:6;s:1:"-";i:7;s:8:"fluoride";i:8;s:0:"";i:9;s:13:"522965-523334";i:10;s:1:"-";i:11;s:13:"HY04AAS1_0586";i:12;s:38:"Putative fluoride ion transporter CrcB";i:13;s:13:"HY04AAS1_0586";i:14;s:6:"Operon";i:15;s:6:"461505";i:16;s:69:"HY04AAS1_0582;HY04AAS1_0583;HY04AAS1_0584;HY04AAS1_0585;HY04AAS1_0586";i:17;s:0:"";i:18;s:15:"View Structure ";}}
