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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
624144-624272
(+)
TPP
624342-625560 (+)
Mrad2831_0577
Glycine oxidase ThiO
Mrad2831_0577
Operon
DOOR ID:
405414
Mrad2831_0577,
Mrad2831_0578,
Mrad2831_0579,
Mrad2831_0580
View Structure
2
898814-899007
(+)
cobalamin
899291-901475 (+)
Mrad2831_0859
TonB-dependent siderophore receptor
Mrad2831_0859
Operon
DOOR ID:
405468
Mrad2831_0859,
Mrad2831_0860
View Structure
3
1627467-1627577
(-)
glycine
1626138-1627401 (-)
Mrad2831_1542
D-amino-acid dehydrogenase
Mrad2831_1542
Single gene
DOOR ID:
2249419
Mrad2831_1542
View Structure
4
1627581-1627683
(-)
glycine
1626138-1627401 (-)
Mrad2831_1542
D-amino-acid dehydrogenase
Mrad2831_1542
Single gene
DOOR ID:
2249419
Mrad2831_1542
View Structure
5
3290656-3290851
(+)
cobalamin
3290852-3291068 (+)
Mrad2831_3111
Cobalt transporter; subunit CbtB
Mrad2831_3111
Operon
DOOR ID:
405903
Mrad2831_3111,
Mrad2831_3112,
Mrad2831_3113,
Mrad2831_3114,
Mrad2831_3115
(cobN)
,
Mrad2831_3116,
Mrad2831_3117,
Mrad2831_3118,
Mrad2831_3119
View Structure
6
3362209-3362314
(+)
TPP
3362385-3364272 (+)
Mrad2831_3185
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Mrad2831_3185
Single gene
DOOR ID:
2250145
Mrad2831_3185
View Structure
7
4759637-4759698
(+)
fluoride
4759777-4760209 (+)
Mrad2831_4479
Putative fluoride ion transporter CrcB
Mrad2831_4479
Single gene
DOOR ID:
2250771
Mrad2831_4479
View Structure
Genome:
Methylobacterium radiotolerans JCM 2831
(
NC_010505.1
);
Phylum:
Alphaproteobacteria
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