Genome: Desulfococcus oleovorans Hxd3 (NC_009943.1); Phylum: delta/epsilon subdivisions
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 782837-782941 (+)SAH783120-783549 (-)Dole_0656

Peptidyl-prolyl cis-trans isomerase
Dole_0656Single gene

DOOR ID: 2159908
Dole_0656 View Structure
2 2080979-2081056 (+)c-di-GMP-I2081142-2083383 (+)Dole_1733

Uncharacterized protein
Dole_1733single gene

DOOR ID: 2160304
Dole_1733 View Structure
3 2088664-2088850 (-)cobalamin2086820-2088551 (-)Dole_1738

MotA/TolQ/ExbB proton channel
Dole_1738Operon

DOOR ID: 364739
Dole_1737,
Dole_1738
View Structure
4 2146004-2146128 (+)SAH2146927-2147614 (+)Dole_1781

Glycerophosphoryl diester phosphodiesterase
Dole_1781Operon

DOOR ID: 364748
Dole_1780,
Dole_1781
View Structure
5 2248438-2248627 (+)cobalamin2248751-2249012 (+)Dole_1858

Dole_1858Operon

DOOR ID: 364766
Dole_1858,
Dole_1859
View Structure
6 2287327-2287442 (-)SAH2283713-2287262 (-)Dole_1885

DNA-directed DNA polymerase
Dole_1885Operon

DOOR ID: 364771
Dole_1884,
Dole_1885
View Structure
7 2517001-2517194 (+)cobalamin2517237-2518368 (+)Dole_2065

Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) (1) (N(1)-alpha-phosphoribosyltransferase)
Dole_2065Single gene

DOOR ID: 2160453
Dole_2065 View Structure
8 2932039-2932133 (-)TPP2930645-2931926 (-)Dole_2427

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Dole_2427Single gene

DOOR ID: 2160593
Dole_2427 View Structure
9 3573766-3573832 (+)fluoride3574302-3574704 (+)Dole_2979

Putative fluoride ion transporter CrcB
Dole_2979Single gene

DOOR ID: 2160836
Dole_2979 View Structure