Genome: Vibrio harveyi ATCC BAA-1116 chromosome I (NC_009783.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 253548-253749 (-)cobalamin251636-253490 (-)VIBHAR_00261

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)
VIBHAR_00261Single gene

DOOR ID: 2125800
VIBHAR_00261 View Structure
2 354753-354851 (-)TPP352646-354587 (-)VIBHAR_00366

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
VIBHAR_00366Operon

DOOR ID: 349043
VIBHAR_00361 (thiH),
VIBHAR_00362 (thiG),
VIBHAR_00363,
VIBHAR_00364,
VIBHAR_00365 (thiE),
VIBHAR_00366
View Structure
3 437152-437267 (+)yybP-ykoY437359-437914 (+)VIBHAR_00451

VIBHAR_00451Single gene

DOOR ID: 2125874
VIBHAR_00451 View Structure
4 770477-770626 (+)TPP770694-771687 (+)tbpA

VIBHAR_00788Operon

DOOR ID: 349113
VIBHAR_00788 (tbpA),
VIBHAR_00789 (thiP),
VIBHAR_00790
View Structure
5 1587993-1588082 (-)c-di-GMP-I1587285-1587876 (-)VIBHAR_01580

Uncharacterized protein
VIBHAR_01580single gene

DOOR ID: 2126360
VIBHAR_01580 View Structure
6 1841850-1842030 (+)lysine1842139-1843741 (+)VIBHAR_01828

VIBHAR_01828Single gene

DOOR ID: 2126461
VIBHAR_01828 View Structure
7 2485238-2485339 (+)glycine2485455-2486832 (+)VIBHAR_02469

VIBHAR_02469Single gene

DOOR ID: 2126752
VIBHAR_02469 View Structure
8 2978035-2978168 (-)MOCO2976444-2976957 (-)VIBHAR_02953

Molybdenum cofactor biosynthesis protein B
VIBHAR_02953Operon

DOOR ID: 349508
VIBHAR_02950,
VIBHAR_02951 (moaD),
VIBHAR_02952 (moaC),
VIBHAR_02953,
VIBHAR_02954 (moaA)
View Structure
9 3337036-3337110 (+)fluoride3337340-3338063 (+)VIBHAR_03307

VIBHAR_03307Operon

DOOR ID: 349572
VIBHAR_03307,
VIBHAR_03308
View Structure
10 3751076-3751254 (+)lysine3751377-3752730 (+)VIBHAR_03711

Aspartokinase
VIBHAR_03711Single gene

DOOR ID: 2127305
VIBHAR_03711 View Structure