Genome: Staphylococcus aureus subsp. aureus str. Newman (NC_009641.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 15955-16053 (+)SAM16112-17081 (+)NWMN_0011

NWMN_0011Single gene

DOOR ID: 2083190
NWMN_0011 View Structure
2 425734-425836 (+)purine426066-426645 (+)NWMN_0378

Xanthine phosphoribosyltransferase (XPRTase) (2)
NWMN_0378Operon

DOOR ID: 327608
NWMN_0378,
NWMN_0379 (pbuX),
NWMN_0380 (guaB),
NWMN_0381 (guaA)
View Structure
3 762530-762576 (-)PreQ1761691-762360 (-)NWMN_0681

7-cyano-7-deazaguanine synthase (0) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)
NWMN_0681Operon

DOOR ID: 327674
NWMN_0679,
NWMN_0680,
NWMN_0681
View Structure
4 869718-869821 (+)SAM869909-870935 (+)NWMN_0780

Methionine import ATP-binding protein MetN
NWMN_0780Operon

DOOR ID: 327691
NWMN_0780,
NWMN_0781,
NWMN_0782
View Structure
5 911231-911321 (+)preQ1-II912327-912705 (+)NWMN_0825

NWMN_0825Single gene

DOOR ID: 2083538
NWMN_0825 View Structure
6 988674-988780 (+)yybP-ykoY988855-989659 (+)NWMN_0891

NWMN_0891Single gene

DOOR ID: 2083562
NWMN_0891 View Structure
7 1050460-1050560 (-)TPP1049807-1050383 (-)NWMN_0945

NWMN_0945Operon

DOOR ID: 327724
NWMN_0943,
NWMN_0944,
NWMN_0945
View Structure
8 1436526-1436701 (+)lysine1436782-1437988 (+)lysC

Aspartokinase
NWMN_1304Operon

DOOR ID: 327793
NWMN_1304 (lysC),
NWMN_1305 (asd),
NWMN_1306 (dapA),
NWMN_1307 (dapB),
NWMN_1308 (dapD)
View Structure
9 1561536-1561670 (-)FMN1560928-1561474 (-)NWMN_1393

Riboflavin transporter
NWMN_1393Single gene

DOOR ID: 2083746
NWMN_1393 View Structure
10 1612782-1612879 (-)glycine1611615-1612707 (-)gcvT

Aminomethyltransferase (0) (Glycine cleavage system T protein)
NWMN_1441Operon

DOOR ID: 327828
NWMN_1439 (gcvPB),
NWMN_1440 (gcvPA),
NWMN_1441 (gcvT)
View Structure
11 1742274-1742449 (-)lysine1740635-1742129 (-)lysP

Lysine-specific permease
NWMN_1575Single gene

DOOR ID: 2083789
NWMN_1575 (lysP) View Structure
12 1858928-1859063 (-)FMN1857757-1858801 (-)ribD

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
NWMN_1662Operon

DOOR ID: 327875
NWMN_1659 (ribH),
NWMN_1660 (ribA),
NWMN_1661 (ribB),
NWMN_1662 (ribD)
View Structure
13 1875707-1875817 (-)SAM1874407-1875601 (-)metK

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)
NWMN_1680Single gene

DOOR ID: 2083842
NWMN_1680 (metK) View Structure
14 2219975-2220077 (-)TPP2219205-2219895 (-)NWMN_1998

Aminopyrimidine aminohydrolase
NWMN_1998Operon

DOOR ID: 327945
NWMN_1995 (thiE),
NWMN_1996 (thiM),
NWMN_1997 (thiD),
NWMN_1998
View Structure
15 2276717-2276933 (-)glmS2274709-2276515 (-)glmS

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
NWMN_2056Single gene

DOOR ID: 2083990
NWMN_2056 (glmS) View Structure
16 2449288-2449383 (-)SAM2447897-2449277 (-)NWMN_2227

Na+/H+ antiporter family protein
NWMN_2227Single gene

DOOR ID: 2084057
NWMN_2227 View Structure