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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
970946-971038
(+)
SAH
972327-973089 (+)
CMM_0852
CMM_0852
Operon
DOOR ID:
305990
CMM_0844
(ftsH)
,
CMM_0845
(folE)
,
CMM_0846
(folP)
,
CMM_0847,
CMM_0848
(folBK)
,
CMM_0849,
CMM_0850,
CMM_0851,
CMM_0852,
CMM_0853
(panC)
,
CMM_0854
(lysS)
,
CMM_0855,
CMM_0856
View Structure
2
1107917-1108061
(-)
FMN
1106775-1107846 (-)
ribD
Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
CMM_0963
Operon
DOOR ID:
306017
CMM_0960
(ribH)
,
CMM_0961
(ribAB)
,
CMM_0962
(ribC)
,
CMM_0963
(ribD)
View Structure
3
1627683-1627783
(+)
TPP
1627818-1628481 (+)
CMM_1434
Putative ABC-type transporter; permease component
CMM_1434
Operon
DOOR ID:
306122
CMM_1434,
CMM_1435,
CMM_1436,
CMM_1437,
CMM_1438
View Structure
4
2388449-2388540
(+)
TPP
2389354-2391586 (+)
thiED
Thiamine-phosphate synthase (TP synthase) (TPS) (Thiamine-phosphate pyrophosphorylase) (TMP pyrophosphorylase) (TMP-PPase)
CMM_2116
Operon
DOOR ID:
306270
CMM_2115
(thiM)
,
CMM_2116
(thiED)
View Structure
5
2494561-2494647
(-)
glycine
2493201-2494422 (-)
gcvT
Aminomethyltransferase (0) (Glycine cleavage system T protein)
CMM_2197
Operon
DOOR ID:
306289
CMM_2195
(gcvP)
,
CMM_2196
(gcvH)
,
CMM_2197
(gcvT)
View Structure
6
2838247-2838330
(-)
ZMP-ZTP
2836936-2838214 (-)
glyA
Serine hydroxymethyltransferase (SHMT) (Serine methylase)
CMM_2522
Operon
DOOR ID:
306368
CMM_2521
(folD)
,
CMM_2522
(glyA)
View Structure
7
3063807-3063871
(-)
ykkC-III
3063472-3063796 (-)
CMM_2732
CMM_2732
single gene
DOOR ID:
2042022
CMM_2732
View Structure
8
3192905-3193014
(+)
yybP-ykoY
3193114-3194224 (+)
CMM_2869
Conserved membrane protein
CMM_2869
Single gene
DOOR ID:
2042064
CMM_2869
View Structure
Genome:
Clavibacter michiganensis subsp. michiganensis NCPPB 382
(
NC_009480.1
);
Phylum:
Actinobacteria
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