RiboswitchDB

Genome: Streptococcus suis 98HAH33 (NC_009443.1); Phylum: Firmicutes

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

125650-125794 (+)

THF

126445-127702 (+)

SSU98_0139

Single gene

DOOR ID: 2031463

SSU98_0139

2

236006-236110 (+)

glycine

236216-237551 (+)

SSU98_0245

Single gene

DOOR ID: 2031499

SSU98_0245

3

505634-505729 (-)

TPP

505026-505575 (-)

SSU98_0515

Single gene

DOOR ID: 2031594

SSU98_0515

4

712644-712733 (+)

TPP

713067-713715 (+)

SSU98_0731

Operon

DOOR ID: 301357

SSU98_0731,
SSU98_0732,
SSU98_0733,
SSU98_0734,
SSU98_0735 (thiE)

5

1533471-1533573 (-)

preQ1-II

1531999-1532968 (-)

SSU98_1624

Operon

DOOR ID: 301574

SSU98_1622,
SSU98_1623,
SSU98_1624,
SSU98_1625

6

1608217-1608431 (-)

FMN

1607600-1608206 (-)

SSU98_1708

Operon

DOOR ID: 301593

SSU98_1706,
SSU98_1708

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