Genome: Pseudomonas stutzeri A1501 (NC_009434.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 930485-930634 (+)FMN930754-931417 (+)ribE-1

Riboflavin synthase; alpha subunit		PST_0836Operon

DOOR ID: 295464		PST_0836 (ribE-1),
PST_0837 (ribBA-1),
PST_0838 (ribH),
PST_0839 (nusB),
PST_0840 (thiL),
PST_0841		 View Structure
2 939719-939935 (-)cobalamin937756-939622 (-)PST_0846

TonB-dependent receptor; B12 family		PST_0846Single gene

DOOR ID: 2020512		PST_0846 View Structure
3 1223022-1223144 (-)yybP-ykoY1222342-1222930 (-)PST_1115

PST_1115Single gene

DOOR ID: 2020603		PST_1115 View Structure
4 1397689-1397909 (+)cobalamin1398062-1399880 (+)PST_1289

TonB-dependent receptor		PST_1289Operon

DOOR ID: 295553		PST_1289,
PST_1290,
PST_1291 (cobO)		 View Structure
5 2173996-2174098 (-)ykkC-yxkD2172945-2173947 (-)PST_2003

ABC-type nitrate/sulfonate/bicarbonate transport system; periplasmic component		PST_2003Operon

DOOR ID: 295689		PST_1995,
PST_1996,
PST_1997,
PST_1998,
PST_1999,
PST_2000,
PST_2001,
PST_2002,
PST_2003		 View Structure
6 2184399-2184496 (-)ykkC-yxkD2183451-2184267 (-)PST_2011

ABC transporter; permease protein		PST_2011Operon

DOOR ID: 295690		PST_2008,
PST_2009,
PST_2010,
PST_2011		 View Structure
7 3503948-3504036 (-)SAH3502207-3503401 (-)PST_3241

Carboxynorspermidine dehydrogenase		PST_3241Operon

DOOR ID: 295947		PST_3241,
PST_3242 (nspC)		 View Structure
8 3782462-3782508 (-)mini-ykkC3780919-3782209 (+)lamB

PST_3491Operon

DOOR ID: 295999		PST_3490 (lamB),
PST_3491		 View Structure
9 4128676-4128782 (-)TPP4126695-4128579 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		PST_3816Single gene

DOOR ID: 2021631		PST_3816 (thiC) View Structure
10 4264519-4264605 (+)SAH4264629-4266036 (+)sahH

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)		PST_3935Operon

DOOR ID: 296094		PST_3935 (sahH),
PST_3936 (metF)		 View Structure
11 4464611-4464699 (-)glycine4463192-4464452 (-)PST_4110

D-amino acid dehydrogenase; small subunit		PST_4110Single gene

DOOR ID: 2021730		PST_4110 View Structure