Genome: Acidovorax citrulli AAC00-1 (NC_008752.1); Phylum: Betaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 75909-76183 (+)cobalamin76274-77156 (+)Aave_0068

Precorrin-4 C11-methyltransferase (33)
Aave_0068Single gene

DOOR ID: 1945283
Aave_0068 View Structure
2 236385-236499 (+)SAH236528-239252 (+)Aave_0214

Methionine synthase (3) (5-methyltetrahydrofolate--homocysteine methyltransferase)
Aave_0214Single gene

DOOR ID: 1945338
Aave_0214 View Structure
3 897850-897976 (+)TPP898142-899996 (+)Aave_0829

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Aave_0829Single gene

DOOR ID: 1945527
Aave_0829 View Structure
4 1702222-1702487 (+)cobalamin1702660-1704442 (+)Aave_1537

TonB-dependent receptor
Aave_1537Operon

DOOR ID: 259007
Aave_1537,
Aave_1538,
Aave_1539,
Aave_1540,
Aave_1541,
Aave_1542
View Structure
5 3298357-3298515 (+)ZMP-ZTP3298553-3299798 (+)glyA

Serine hydroxymethyltransferase (SHMT) (Serine methylase)
Aave_2992Operon

DOOR ID: 259306
Aave_2992 (glyA),
Aave_2993 (nrdR)
View Structure
6 3381740-3381839 (+)TPP3381910-3383029 (+)Aave_3068

Glycine oxidase (9)
Aave_3068Operon

DOOR ID: 259322
Aave_3068,
Aave_3069,
Aave_3070 (thiG),
Aave_3071
View Structure
7 3470552-3470649 (+)glycine3470866-3471997 (+)Aave_3145

Glycine cleavage system T protein
Aave_3145Single gene

DOOR ID: 1946293
Aave_3145 View Structure
8 3470669-3470801 (+)glycine3470866-3471997 (+)Aave_3145

Glycine cleavage system T protein
Aave_3145Single gene

DOOR ID: 1946293
Aave_3145 View Structure
9 3498187-3498256 (-)fluoride3496196-3497366 (+)Aave_3167

Aminotransferase
Aave_3167Operon

DOOR ID: 259343
Aave_3166,
Aave_3167
View Structure
10 4511862-4511958 (-)SAH4510366-4511794 (-)Aave_4060

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
Aave_4060Single gene

DOOR ID: 1946631
Aave_4060 View Structure
11 5005957-5006066 (+)glycine5006153-5007473 (+)Aave_4507

D-amino acid dehydrogenase small subunit
Aave_4507Single gene

DOOR ID: 1946781
Aave_4507 View Structure
12 5017644-5017735 (-)TPP5016456-5017551 (-)Aave_4517

Putative acyl protein synthase/acyl-CoA reductase-like protein
Aave_4517Operon

DOOR ID: 259623
Aave_4514,
Aave_4515,
Aave_4516,
Aave_4517
View Structure
13 5334187-5334375 (-)yybP-ykoY5333600-5334179 (-)Aave_4779

Aave_4779Single gene

DOOR ID: 1946902
Aave_4779 View Structure