Genome: Arthrobacter aurescens TC1 (NC_008711.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 421176-421367 (+)ydaO-yuaA421370-422165 (+)AAur_0408

AAur_0408Single gene

DOOR ID: 1937129
AAur_0408 View Structure
2 834348-834532 (-)ydaO-yuaA832179-833199 (-)AAur_0800

Putative dolichyl-phosphate beta-glucosyltransferase
AAur_0800Single gene

DOOR ID: 1937811
AAur_0800 View Structure
3 883426-883524 (+)glycine883675-885142 (+)AAur_0842

Putative D-serine/D-alanine/glycine transporter
AAur_0842Single gene

DOOR ID: 1938411
AAur_0842 View Structure
4 1042789-1042886 (+)glycine1043064-1045911 (+)gcvP

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))
AAur_0987Operon

DOOR ID: 254275
AAur_0987 (gcvP),
AAur_0988 (gcvT)
View Structure
5 1078081-1078321 (+)ydaO-yuaA1078325-1079162 (+)AAur_1018

M23 peptidase domain protein
AAur_1018Single gene

DOOR ID: 1937772
AAur_1018 View Structure
6 1079302-1079469 (+)ydaO-yuaA1079807-1080596 (+)AAur_1019

AAur_1019Single gene

DOOR ID: 1937551
AAur_1019 View Structure
7 1118155-1118274 (-)SAM-IV1117808-1118138 (-)AAur_1052

AAur_1052Single gene

DOOR ID: 1938167
AAur_1052 View Structure
8 1308906-1308991 (+)ZMP-ZTP1309107-1310400 (+)glyA

Serine hydroxymethyltransferase (SHMT) (Serine methylase)
AAur_1227Operon

DOOR ID: 254328
AAur_1227 (glyA),
AAur_1228,
AAur_1229,
AAur_1230,
AAur_1231
View Structure
9 1618337-1618453 (+)SAM-IV1618468-1619590 (+)metX

Homoserine O-acetyltransferase (HAT) (1) (Homoserine transacetylase) (HTA)
AAur_1475Single gene

DOOR ID: 1938114
AAur_1475 (metX) View Structure
10 1993260-1993414 (+)FMN1993503-1994208 (+)AAur_1825

Putative nicotinamide mononucleotide transporter PnuC
AAur_1825Operon

DOOR ID: 254445
AAur_1825,
AAur_1826 (ribD),
AAur_1827 (ribE)
View Structure
11 2561383-2561433 (-)glutamine2559725-2561228 (-)AAur_2323

Putative iron-sulfur cluster-binding protein; rieske family
AAur_2323Single gene

DOOR ID: 1938481
AAur_2323 View Structure
12 2604169-2604267 (-)TPP2601944-2602265 (-)rplU

50S ribosomal protein L21
AAur_2367Single gene

DOOR ID: 1937754
AAur_2367 (rplU) View Structure
13 2690644-2690751 (+)TPP2692597-2693320 (-)AAur_2456

AAur_2456Single gene

DOOR ID: 1937644
AAur_2456 View Structure
14 2904762-2904875 (+)SAM-IV2904906-2906316 (+)AAur_2646

Aminotransferase; class V protein
AAur_2646Single gene

DOOR ID: 1938395
AAur_2646 View Structure
15 2949169-2949262 (-)SAH2947953-2948202 (+)AAur_2682

Transcriptional regulator WhiB
AAur_2682Single gene

DOOR ID: 1937329
AAur_2682 View Structure
16 3045073-3045191 (-)TPP3043578-3043815 (-)thiS

Thiamine biosynthesis protein ThiS
AAur_2763Operon

DOOR ID: 254643
AAur_2761,
AAur_2762 (thiG),
AAur_2763 (thiS),
AAur_2764 (thiO)
View Structure
17 3791746-3791855 (-)SAM-IV3789146-3790562 (-)AAur_3439

Putative monooxygenase
AAur_3439Operon

DOOR ID: 254799
AAur_3435,
AAur_3436,
AAur_3437,
AAur_3438,
AAur_3439,
AAur_3440
View Structure
18 3894383-3894448 (+)ykkC-III3894457-3894772 (+)AAur_3544

AAur_3544operon

DOOR ID: 254817
AAur_3544,
AAur_3545
View Structure
19 4015360-4015471 (+)SAM-IV4015484-4015751 (+)AAur_3662

AAur_3662Operon

DOOR ID: 254843
AAur_3662,
AAur_3663,
AAur_3664 (metB),
AAur_3666
View Structure
20 4027804-4027940 (-)TPP4027105-4027726 (-)AAur_3673

Putative integral membrane protein
AAur_3673Operon

DOOR ID: 254845
AAur_3670,
AAur_3672,
AAur_3673
View Structure
21 4242499-4242644 (+)ydaO-yuaA4242658-4243963 (+)AAur_3868

AAur_3868Single gene

DOOR ID: 1938193
AAur_3868 View Structure
22 4380689-4380787 (-)glycine4377688-4380553 (-)gcvP

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))
AAur_4007Operon

DOOR ID: 254910
AAur_4004 (glyA),
AAur_4005 (gcvH),
AAur_4006 (gcvT),
AAur_4007 (gcvP)
View Structure