Genome: Shewanella amazonensis SB2B (NC_008700.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 165438-165648 (-)FMN164602-165271 (-)Sama_0143

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)		Sama_0143Single gene

DOOR ID: 1930232		Sama_0143 View Structure
2 754668-754843 (+)lysine754981-756340 (+)Sama_0603

Aspartokinase 		Sama_0603Operon

DOOR ID: 250078		Sama_0603,
Sama_0604		 View Structure
3 943013-943165 (+)cobalamin943263-944079 (+)Sama_0760

Iron-compound ABC transporter; ATP-binding protein; putative		Sama_0760Operon

DOOR ID: 250102		Sama_0760,
Sama_0761,
Sama_0762 (cobT),
Sama_0763,
Sama_0764,
Sama_0765,
Sama_0766		 View Structure
4 1428768-1428967 (+)lysine1429043-1430606 (+)Sama_1171

Na+/H+ antiporter NhaC		Sama_1171Single gene

DOOR ID: 1930692		Sama_1171 View Structure
5 1761213-1761318 (+)TPP1761371-1763564 (+)Sama_1451

TonB-dependent receptor		Sama_1451Operon

DOOR ID: 250233		Sama_1451,
Sama_1452,
Sama_1453,
Sama_1454		 View Structure
6 2265899-2265997 (-)TPP2263750-2265745 (-)Sama_1860

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		Sama_1860Operon

DOOR ID: 250314		Sama_1857,
Sama_1858,
Sama_1859,
Sama_1860		 View Structure
7 2480965-2481153 (-)ydaO-yuaA2479862-2480489 (-)tmk

Thymidylate kinase (dTMP kinase)		Sama_2043Operon

DOOR ID: 250356		Sama_2041,
Sama_2042,
Sama_2043 (tmk),
Sama_2044		 View Structure
8 3152332-3152464 (-)cobalamin3150303-3152244 (-)Sama_2631

TonB-dependent receptor C-terminal domain protein		Sama_2631Single gene

DOOR ID: 1931328		Sama_2631 View Structure
9 3495014-3495102 (+)yybP-ykoY3495192-3495753 (+)Sama_2940

Sama_2940Single gene

DOOR ID: 1931475		Sama_2940 View Structure
10 3516256-3516385 (-)glycine3514744-3516139 (-)Sama_2953

Sodium:alanine symporter family protein		Sama_2953Single gene

DOOR ID: 1931484		Sama_2953 View Structure
11 3516391-3516495 (-)glycine3514744-3516139 (-)Sama_2953

Sodium:alanine symporter family protein		Sama_2953Single gene

DOOR ID: 1931484		Sama_2953 View Structure
12 4159189-4159323 (+)MOCO4160345-4160882 (+)Sama_3525

Molybdenum cofactor biosynthesis protein B		Sama_3525Operon

DOOR ID: 250632		Sama_3524 (moaA),
Sama_3525,
Sama_3526 (moaC),
Sama_3527,
Sama_3528,
Sama_3529,
Sama_3530,
Sama_3531		 View Structure