Genome: Mycobacterium ulcerans Agy99 (NC_008611.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 140970-141190 (+)cobalamin141240-143616 (+)metE

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)
MUL_0138Single gene

DOOR ID: 1922600
MUL_0138 (metE) View Structure
2 290980-291193 (+)ydaO-yuaA291202-292066 (+)rpfA

Resuscitation-promoting factor RpfA
MUL_0283Single gene

DOOR ID: 1922664
MUL_0283 (rpfA) View Structure
3 406792-406873 (+)SAH411027-411759 (+)MUL_0396

MUL_0396Operon

DOOR ID: 1177119
MUL_0396,
MUL_0397
View Structure
4 1553311-1553430 (-)SAM-IV1551920-1553270 (-)metC

O-acetylhomoserine sulfhydrylase MetC
MUL_1438Operon

DOOR ID: 1177290
MUL_1436,
MUL_1437 (metX),
MUL_1438 (metC)
View Structure
5 1645618-1645787 (+)ykoK1646072-1646306 (+)MUL_1522

MUL_1522Single gene

DOOR ID: 1923144
MUL_1522 View Structure
6 3045327-3045401 (+)fluoride3045589-3046669 (+)MUL_2726

MUL_2726Single gene

DOOR ID: 1923594
MUL_2726 View Structure
7 3132109-3132239 (-)TPP3130904-3131102 (-)thiS

Thiamine biosynthesis protein ThiS
MUL_2804Operon

DOOR ID: 1177509
MUL_2802,
MUL_2803 (thiG),
MUL_2804 (thiS),
MUL_2805 (thiO)
View Structure
8 3207195-3207260 (-)ykkC-III3205340-3206543 (+)mce3R

MUL_2880single gene

DOOR ID: 1923672
MUL_2880 (mce3R) View Structure
9 3374093-3374190 (+)glycine3374382-3377220 (+)gcvB

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))
MUL_3050Single gene

DOOR ID: 1923739
MUL_3050 (gcvB) View Structure
10 3374191-3374316 (+)glycine3374382-3377220 (+)gcvB

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))
MUL_3050Single gene

DOOR ID: 1923739
MUL_3050 (gcvB) View Structure
11 3411396-3411572 (-)ykoK3409754-3410915 (-)MUL_3074

PPE family protein
MUL_3074Single gene

DOOR ID: 1923756
MUL_3074 View Structure
12 3995830-3995941 (-)TPP3994188-3995829 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
MUL_3600Operon

DOOR ID: 1177612
MUL_3599 (thiD),
MUL_3600 (thiC)
View Structure
13 5325906-5326076 (-)ykoK5325391-5325574 (-)MUL_4808

MUL_4808Single gene

DOOR ID: 1924483
MUL_4808 View Structure