Genome: Acidothermus cellulolyticus 11B (NC_008578.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 58984-59097 (-)TPP57211-58969 (-)Acel_0052

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Acel_0052Single gene

DOOR ID: 1912231
Acel_0052 View Structure
2 103256-103415 (+)SAM103431-104688 (+)Acel_0100

L-threonine synthase
Acel_0100Single gene

DOOR ID: 1912246
Acel_0100 View Structure
3 804061-804142 (-)fluoride802963-803926 (-)Acel_0731

Respiratory-chain NADH dehydrogenase; subunit 1
Acel_0731Operon

DOOR ID: 240570
Acel_0726,
Acel_0727,
Acel_0728,
Acel_0729,
Acel_0730,
Acel_0731
View Structure
4 805841-805902 (+)fluoride805916-807467 (+)Acel_0734

DNA mismatch repair protein MutS domain protein
Acel_0734Operon

DOOR ID: 240571
Acel_0734,
Acel_0735
View Structure
5 1044596-1044740 (-)cobalamin1043219-1044467 (-)Acel_0946

LPXTG-motif cell wall anchor domain protein
Acel_0946Operon

DOOR ID: 240618
Acel_0939,
Acel_0940,
Acel_0941,
Acel_0942,
Acel_0943,
Acel_0944,
Acel_0945,
Acel_0946
View Structure
6 1069182-1069310 (+)ydaO-yuaA1069322-1070360 (+)Acel_0971

NLP/P60 protein
Acel_0971Operon

DOOR ID: 240623
Acel_0971,
Acel_0972
View Structure
7 1089799-1089911 (-)TPP1088556-1089771 (-)Acel_0989

Glycine oxidase (9)
Acel_0989Operon

DOOR ID: 240627
Acel_0987 (thiG),
Acel_0988,
Acel_0989
View Structure
8 1364125-1364219 (-)glycine1361103-1363998 (-)Acel_1222

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))
Acel_1222Operon

DOOR ID: 240680
Acel_1221,
Acel_1222
View Structure
9 1422007-1422141 (-)FMN1420842-1421943 (-)Acel_1274

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
Acel_1274Operon

DOOR ID: 240691
Acel_1271 (ribH),
Acel_1272,
Acel_1273,
Acel_1274
View Structure
10 1939207-1939426 (+)cobalamin1939463-1941818 (+)Acel_1723

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)
Acel_1723Single gene

DOOR ID: 1912761
Acel_1723 View Structure
11 1942077-1942287 (+)cobalamin1942584-1944930 (+)Acel_1724

Ribonucleoside-diphosphate reductase
Acel_1724Operon

DOOR ID: 240791
Acel_1724,
Acel_1725
View Structure
12 2090037-2090130 (-)glycine2088751-2089912 (-)Acel_1847

Aminomethyltransferase (0) (Glycine cleavage system T protein)
Acel_1847Single gene

DOOR ID: 1912804
Acel_1847 View Structure
13 2229255-2229380 (+)yybP-ykoY2229426-2230458 (+)Acel_1963

Sodium/calcium exchanger membrane region
Acel_1963Single gene

DOOR ID: 1912844
Acel_1963 View Structure
14 2372860-2373007 (-)ydaO-yuaA2371727-2372855 (-)Acel_2096

NLP/P60 protein
Acel_2096Single gene

DOOR ID: 1912900
Acel_2096 View Structure