RiboswitchDB

Genome: Candidatus Solibacter usitatus Ellin6076 (NC_008536.1); Phylum: Solibacteres

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

163462-163633 (+)

cobalamin

163658-165839 (+)

Acid_0122

TonB-dependent receptor

Single gene

DOOR ID: 1892518

Acid_0122

2

2095125-2095227 (+)

SAM

2095298-2096732 (+)

Acid_1683

ATPase associated with various cellular activities; AAA_5

Operon

DOOR ID: 231767

Acid_1683,
Acid_1684,
Acid_1685,
Acid_1686

3

5838272-5838399 (+)

ydaO-yuaA

5838426-5840658 (+)

Acid_4619

Amino acid transporters

Single gene

DOOR ID: 1894200

Acid_4619

4

8773219-8773413 (-)

lysine

8772135-8773155 (-)

Acid_6984

Peptidase dimerisation domain protein

Operon

DOOR ID: 232915

Acid_6982,
Acid_6983,
Acid_6984

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