Genome: Rhodococcus jostii RHA1 (NC_008268.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 230767-230910 (-)cobalamin226674-227076 (-)RHA1_ro00170

RHA1_ro00170Operon

DOOR ID: 210592		RHA1_ro00170,
RHA1_ro00171 (cobN)		 View Structure
2 963517-963640 (-)glycine960489-963342 (-)gcvP1

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))		RHA1_ro00902Single gene

DOOR ID: 1844031		RHA1_ro00902 (gcvP1) View Structure
3 1199382-1199546 (-)ydaO-yuaA1198821-1199064 (-)RHA1_ro01125

Possible secreted protein		RHA1_ro01125Single gene

DOOR ID: 1844104		RHA1_ro01125 View Structure
4 1682982-1683077 (+)TPP1683789-1684818 (+)RHA1_ro01598

Probable ABC transporter; permease component		RHA1_ro01598Operon

DOOR ID: 210879		RHA1_ro01597,
RHA1_ro01598,
RHA1_ro01599,
RHA1_ro01600		 View Structure
5 2292277-2292384 (+)TPP2294033-2294879 (+)thiD

Phosphomethylpyrimidine kinase 		RHA1_ro02183Operon

DOOR ID: 211000		RHA1_ro02182 (thiC),
RHA1_ro02183 (thiD)		 View Structure
6 2301321-2301435 (-)TPP2300029-2300254 (-)RHA1_ro02189

Sulfur transfer protein ThiS		RHA1_ro02189Operon

DOOR ID: 211002		RHA1_ro02186,
RHA1_ro02187,
RHA1_ro02188 (thiG),
RHA1_ro02189,
RHA1_ro02190		 View Structure
7 2358814-2358907 (-)SAM2356938-2358573 (-)RHA1_ro02224

ABC peptide transporter; permease component		RHA1_ro02224Operon

DOOR ID: 211007		RHA1_ro02207,
RHA1_ro02208 (hbd2),
RHA1_ro02209,
RHA1_ro02210,
RHA1_ro02211,
RHA1_ro02212,
RHA1_ro02213,
RHA1_ro02214,
RHA1_ro02215,
RHA1_ro02216,
RHA1_ro02217,
RHA1_ro02218,
RHA1_ro02219,
RHA1_ro02220,
RHA1_ro02221,
RHA1_ro02222,
RHA1_ro02223,
RHA1_ro02224		 View Structure
8 2366028-2366124 (-)SAM2364819-2365677 (-)RHA1_ro02231

ABC amino acid transporter; permease component		RHA1_ro02231Operon

DOOR ID: 211008		RHA1_ro02225,
RHA1_ro02226,
RHA1_ro02227,
RHA1_ro02228,
RHA1_ro02229,
RHA1_ro02230,
RHA1_ro02231		 View Structure
9 3091300-3091400 (-)glycine3090483-3091212 (-)RHA1_ro02926

RHA1_ro02926Operon

DOOR ID: 211146		RHA1_ro02925,
RHA1_ro02926		 View Structure
10 3091404-3091495 (-)glycine3090483-3091212 (-)RHA1_ro02926

RHA1_ro02926Operon

DOOR ID: 211146		RHA1_ro02925,
RHA1_ro02926		 View Structure
11 3094320-3094411 (+)glycine3094532-3097487 (+)gcvP2

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))		RHA1_ro02930Operon

DOOR ID: 211148		RHA1_ro02930 (gcvP2),
RHA1_ro02931 (gcvT),
RHA1_ro02932,
RHA1_ro02933 (glyA),
RHA1_ro02934 (sdaA)		 View Structure
12 4627893-4628007 (+)SAM-IV4628058-4629354 (+)RHA1_ro04390

Probable cysteine desulfurase (6)		RHA1_ro04390Single gene

DOOR ID: 1845255		RHA1_ro04390 View Structure
13 4671485-4671618 (-)cobalamin4670482-4671277 (-)RHA1_ro04435

RHA1_ro04435Single gene

DOOR ID: 1845274		RHA1_ro04435 View Structure
14 5005802-5005863 (-)ykkC-III5005476-5005791 (-)RHA1_ro04738

RHA1_ro04738operon

DOOR ID: 211533		RHA1_ro04736,
RHA1_ro04737,
RHA1_ro04738		 View Structure
15 5166161-5166265 (+)TPP5167079-5168375 (+)RHA1_ro04901

Monooxygenase 		RHA1_ro04901Operon

DOOR ID: 211575		RHA1_ro04900 (fabG),
RHA1_ro04901		 View Structure
16 5241477-5241690 (-)ydaO-yuaA5240886-5241468 (-)RHA1_ro04962

Possible resuscitation-promoting factor		RHA1_ro04962Single gene

DOOR ID: 1845442		RHA1_ro04962 View Structure
17 6708935-6709069 (+)cobalamin6709162-6710155 (+)RHA1_ro06223

Probable ABC iron transporter; substrate-binding component		RHA1_ro06223Operon

DOOR ID: 211864		RHA1_ro06223,
RHA1_ro06224,
RHA1_ro06225,
RHA1_ro06226		 View Structure
18 6724302-6724422 (-)SAM-IV6722903-6724187 (-)RHA1_ro06237

O-acetylhomoserine aminocarboxypropyltransferase (9)		RHA1_ro06237Operon

DOOR ID: 211867		RHA1_ro06236 (metX),
RHA1_ro06237		 View Structure
19 7516743-7516956 (+)ydaO-yuaA7516964-7517546 (+)RHA1_ro07015

RHA1_ro07015Single gene

DOOR ID: 1846163		RHA1_ro07015 View Structure