Genome: Rubrobacter xylanophilus DSM 9941 (NC_008148.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 554692-554775 (-)fluoride553928-554606 (-)Rxyl_0523

Putative fluoride ion transporter CrcB 2		Rxyl_0523Operon

DOOR ID: 200697		Rxyl_0517,
Rxyl_0518,
Rxyl_0519,
Rxyl_0520,
Rxyl_0521,
Rxyl_0522,
Rxyl_0523		 View Structure
2 663892-664074 (+)cobalamin664110-664308 (+)Rxyl_0632

Rxyl_0632Operon

DOOR ID: 200724		Rxyl_0632,
Rxyl_0633,
Rxyl_0634,
Rxyl_0635 (cobN),
Rxyl_0636,
Rxyl_0637,
Rxyl_0638,
Rxyl_0639,
Rxyl_0640,
Rxyl_0641 (cbiD),
Rxyl_0642,
Rxyl_0643,
Rxyl_0644,
Rxyl_0645,
Rxyl_0646,
Rxyl_0647,
Rxyl_0648,
Rxyl_0649,
Rxyl_0650,
Rxyl_0651,
Rxyl_0652		 View Structure
3 834459-834620 (+)glmS834711-836550 (+)Rxyl_0799

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		Rxyl_0799Single gene

DOOR ID: 1823021		Rxyl_0799 View Structure
4 881920-882031 (-)SAM880004-881840 (-)Rxyl_0843

Homocysteine S-methyltransferase		Rxyl_0843Operon

DOOR ID: 200766		Rxyl_0841,
Rxyl_0842,
Rxyl_0843		 View Structure
5 1121068-1121189 (+)SAM1121276-1122419 (+)Rxyl_1089

Homoserine O-acetyltransferase (HAT) (1) (Homoserine transacetylase) (HTA)		Rxyl_1089Operon

DOOR ID: 200820		Rxyl_1089,
Rxyl_1090,
Rxyl_1091,
Rxyl_1092		 View Structure
6 1391592-1391741 (+)FMN1391763-1392873 (+)Rxyl_1364

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		Rxyl_1364Operon

DOOR ID: 200877		Rxyl_1364,
Rxyl_1365,
Rxyl_1366,
Rxyl_1367		 View Structure
7 2112145-2112255 (+)TPP2112451-2113123 (+)Rxyl_2083

ABC transporter related		Rxyl_2083Operon

DOOR ID: 201027		Rxyl_2083,
Rxyl_2084,
Rxyl_2085		 View Structure
8 2295936-2296045 (+)SAM2296157-2296397 (+)Rxyl_2283

Rxyl_2283Single gene

DOOR ID: 1823373		Rxyl_2283 View Structure
9 2406044-2406137 (+)TPP2406225-2406984 (+)Rxyl_2395

Thiamine-phosphate synthase (TP synthase) (TPS) (Thiamine-phosphate pyrophosphorylase) (TMP pyrophosphorylase) (TMP-PPase)		Rxyl_2395Operon

DOOR ID: 201084		Rxyl_2395,
Rxyl_2396,
Rxyl_2397		 View Structure
10 2484103-2484272 (+)cobalamin2484311-2485298 (+)Rxyl_2468

Periplasmic binding protein		Rxyl_2468Single gene

DOOR ID: 1823451		Rxyl_2468 View Structure
11 3199887-3199952 (-)glycine3198548-3199838 (-)Rxyl_3186

Probable glycine dehydrogenase (decarboxylating) subunit 1 (Glycine cleavage system P-protein subunit 1) (Glycine decarboxylase subunit 1) (Glycine dehydrogenase (aminomethyl-transferring) subunit 1)		Rxyl_3186Operon

DOOR ID: 201248		Rxyl_3183,
Rxyl_3184,
Rxyl_3185,
Rxyl_3186		 View Structure