RiboswitchDB

Genome: Burkholderia cenocepacia AU 1054 chromosome II (NC_008061.1); Phylum: Betaproteobacteria

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

107764-107907 (+)

cobalamin

107939-108149 (+)

Bcen_3078

Operon

DOOR ID: 196792

Bcen_3078,
Bcen_3079

2

1074362-1074555 (-)

cobalamin

1072217-1074146 (-)

Bcen_3916

TonB-dependent receptor

Single gene

DOOR ID: 1816524

Bcen_3916

3

1826793-1826897 (-)

fluoride

1825471-1826713 (-)

Bcen_4570

Cl-channel; voltage gated

Operon

DOOR ID: 197069

Bcen_4569,
Bcen_4570

4

2033777-2033945 (+)

yybP-ykoY

2034014-2035025 (+)

Bcen_4763

Sodium/calcium exchanger membrane region

Single gene

DOOR ID: 1816919

Bcen_4763

5

2292665-2292695 (-)

glutamine

2290590-2291496 (-)

Bcen_5015

Transcriptional regulator; LysR family

Operon

DOOR ID: 197156

Bcen_5015,
Bcen_5016,
Bcen_5017,
Bcen_5018

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";}}