Genome: Burkholderia cenocepacia AU 1054 chromosome I (NC_008060.1); Phylum: Betaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 359253-359353 (+)ZMP-ZTP359490-360738 (+)glyA

Serine hydroxymethyltransferase (SHMT) (Serine methylase)
Bcen_0323Operon

DOOR ID: 196211
Bcen_0323 (glyA),
Bcen_0324 (nrdR)
View Structure
2 580661-580798 (-)yybP-ykoY580009-580582 (-)Bcen_0538

Bcen_0538Single gene

DOOR ID: 1815149
Bcen_0538 View Structure
3 809928-810044 (-)TPP807871-809803 (-)Bcen_0742

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Bcen_0742Single gene

DOOR ID: 1815230
Bcen_0742 View Structure
4 1292169-1292404 (-)cobalamin1291249-1292059 (-)Bcen_1174

Uroporphyrinogen-III C-methyltransferase (07)
Bcen_1174Operon

DOOR ID: 196382
Bcen_1171,
Bcen_1172,
Bcen_1173,
Bcen_1174
View Structure
5 1294761-1295027 (+)cobalamin1295356-1296445 (+)Bcen_1176

Cobalamin (Vitamin B12) biosynthesis CobW
Bcen_1176Operon

DOOR ID: 196383
Bcen_1176,
Bcen_1177 (cobN),
Bcen_1178,
Bcen_1179,
Bcen_1180,
Bcen_1181
View Structure
6 1317331-1317522 (-)cobalamin1315860-1317309 (-)Bcen_1194

Precorrin-3B synthase
Bcen_1194Operon

DOOR ID: 196386
Bcen_1191,
Bcen_1192,
Bcen_1193 (cobH),
Bcen_1194
View Structure
7 2043833-2044082 (-)cobalamin2042675-2043791 (-)Bcen_1844

Transport system permease protein
Bcen_1844Operon

DOOR ID: 196531
Bcen_1843,
Bcen_1844
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8 2294173-2294321 (-)FMN2293343-2294054 (-)Bcen_2077

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
Bcen_2077Single gene

DOOR ID: 1815768
Bcen_2077 View Structure
9 2963870-2963993 (-)TPP2962507-2963644 (-)Bcen_2697

Glycine oxidase (9)
Bcen_2697Operon

DOOR ID: 196720
Bcen_2694,
Bcen_2695 (thiG),
Bcen_2696,
Bcen_2697
View Structure
10 3112718-3112836 (-)SAH3111266-3112685 (-)Bcen_2835

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
Bcen_2835Operon

DOOR ID: 196749
Bcen_2833,
Bcen_2834,
Bcen_2835
View Structure
11 3205337-3205470 (+)glycine3205553-3206672 (+)gcvT

Aminomethyltransferase (0) (Glycine cleavage system T protein)
Bcen_2909Operon

DOOR ID: 196760
Bcen_2909 (gcvT),
Bcen_2910,
Bcen_2911
View Structure
12 4425129-4425175 (-)mini-ykkC4424273-4424630 (+)YPA_3926

YPA_3926Operon

DOOR ID: 202812
YPA_3923,
YPA_3924,
YPA_3925,
YPA_3926
View Structure