Genome: Staphylococcus aureus subsp. aureus USA300 FPR3757 (NC_007793.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 15975-16073 (+)SAM16132-17101 (+)SAUSA300_0012

Putative homoserine O-acetyltransferase
SAUSA300_0012Single gene

DOOR ID: 1764752
SAUSA300_0012 View Structure
2 436139-436241 (+)purine436471-437050 (+)xpt

Xanthine phosphoribosyltransferase (XPRTase) (2)
SAUSA300_0386Operon

DOOR ID: 174588
SAUSA300_0386 (xpt),
SAUSA300_0387 (pbuX),
SAUSA300_0388 (guaB),
SAUSA300_0389 (guaA)
View Structure
3 772096-772142 (-)PreQ1771257-771926 (-)SAUSA300_0697

7-cyano-7-deazaguanine synthase (0) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)
SAUSA300_0697Operon

DOOR ID: 174654
SAUSA300_0695,
SAUSA300_0696,
SAUSA300_0697
View Structure
4 879109-879212 (+)SAM879300-880326 (+)SAUSA300_0796

Methionine import ATP-binding protein MetN 2
SAUSA300_0796Operon

DOOR ID: 174672
SAUSA300_0796,
SAUSA300_0797,
SAUSA300_0798
View Structure
5 934584-934674 (+)preQ1-II935713-936058 (+)SAUSA300_0858

SAUSA300_0858Single gene

DOOR ID: 1764624
SAUSA300_0858 View Structure
6 1012027-1012133 (+)yybP-ykoY1012208-1013012 (+)SAUSA300_0922

Membrane protein; TerC family
SAUSA300_0922Single gene

DOOR ID: 1765337
SAUSA300_0922 View Structure
7 1073812-1073912 (-)TPP1073159-1073735 (-)SAUSA300_0979

SAUSA300_0979Operon

DOOR ID: 174708
SAUSA300_0977,
SAUSA300_0978,
SAUSA300_0979
View Structure
8 1416547-1416722 (+)lysine1416803-1418009 (+)SAUSA300_1286

Aspartokinase
SAUSA300_1286Operon

DOOR ID: 174766
SAUSA300_1286,
SAUSA300_1287 (asd),
SAUSA300_1288 (dapA),
SAUSA300_1289 (dapB),
SAUSA300_1290 (dapD)
View Structure
9 1542070-1542204 (-)FMN1541462-1542008 (-)SAUSA300_1374

Riboflavin transporter
SAUSA300_1374Single gene

DOOR ID: 1765188
SAUSA300_1374 View Structure
10 1652780-1652877 (-)glycine1651613-1652705 (-)gcvT

Aminomethyltransferase (0) (Glycine cleavage system T protein)
SAUSA300_1498Operon

DOOR ID: 174814
SAUSA300_1496,
SAUSA300_1497,
SAUSA300_1498 (gcvT)
View Structure
11 1782272-1782447 (-)lysine1780633-1782127 (-)lysP

Lysine-specific permease
SAUSA300_1628Single gene

DOOR ID: 1765209
SAUSA300_1628 (lysP) View Structure
12 1898398-1898533 (-)FMN1897227-1898232 (-)ribD

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
SAUSA300_1715Operon

DOOR ID: 174858
SAUSA300_1712 (ribH),
SAUSA300_1713 (ribBA),
SAUSA300_1714 (ribE),
SAUSA300_1715 (ribD)
View Structure
13 1915177-1915287 (-)SAM1913877-1915071 (-)metK

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)
SAUSA300_1730Single gene

DOOR ID: 1764600
SAUSA300_1730 (metK) View Structure
14 2215394-2215496 (-)TPP2214624-2215314 (-)SAUSA300_2050

Aminopyrimidine aminohydrolase (Thiaminase II)
SAUSA300_2050Operon

DOOR ID: 174917
SAUSA300_2047 (thiE),
SAUSA300_2048 (thiM),
SAUSA300_2049 (thiD),
SAUSA300_2050
View Structure
15 2272202-2272418 (-)glmS2270194-2272000 (-)glmS

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
SAUSA300_2104Single gene

DOOR ID: 1764628
SAUSA300_2104 (glmS) View Structure
16 2444774-2444869 (-)SAM2443383-2444763 (-)SAUSA300_2273

Na+/H+ antiporter family protein
SAUSA300_2273Single gene

DOOR ID: 1764809
SAUSA300_2273 View Structure