Genome: Lactobacillus sakei subsp. sakei 23K (NC_007576.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 54641-54746 (-)TPP53759-54586 (-)thiM

LSA0059Operon

DOOR ID: 155753
LSA0055,
LSA0057 (thiE),
LSA0058 (thiD),
LSA0059 (thiM)
View Structure
2 348923-349021 (+)THF349042-349646 (+)LSA0348

LSA0348Single gene

DOOR ID: 1723747
LSA0348 View Structure
3 485164-485249 (+)SMK_box486523-488026 (+)LSA0469

LSA0469Operon

DOOR ID: 155847
LSA0468 (metK),
LSA0469
View Structure
4 819357-819401 (-)PreQ1818363-819357 (-)iunH3

LSA0830Operon

DOOR ID: 155924
LSA0829,
LSA0830 (iunH3)
View Structure
5 957374-957472 (+)TPP957504-958123 (+)LSA0968

LSA0968Single gene

DOOR ID: 1723945
LSA0968 View Structure
6 1013979-1014114 (-)FMN1013247-1013873 (-)LSA1023

LSA1023Single gene

DOOR ID: 1723965
LSA1023 View Structure
7 1082189-1082354 (-)ykoK1081222-1081984 (-)LSA1086

LSA1086Single gene

DOOR ID: 1723986
LSA1086 View Structure
8 1091604-1091693 (-)TPP1090807-1091506 (-)LSA1095

LSA1095Operon

DOOR ID: 155980
LSA1094,
LSA1095
View Structure
9 1597983-1598027 (-)PreQ11596705-1597445 (+)LSA1609

LSA1609Single gene

DOOR ID: 1724162
LSA1609 View Structure
10 1809887-1810064 (-)lysine1808286-1809786 (-)lysP

LSA1817Single gene

DOOR ID: 1724238
LSA1817 (lysP) View Structure