Genome: Desulfovibrio alaskensis G20 (NC_007519.1); Phylum: delta/epsilon subdivisions
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 841128-841197 (+)c-di-GMP-I841230-842778 (+)Dde_0820

Putative two component; sigma54 specific; transcriptional regulator
Dde_0820single gene

DOOR ID: 1719117
Dde_0820 View Structure
2 1078058-1078221 (+)FMN1078351-1079011 (+)Dde_1050

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
Dde_1050Single gene

DOOR ID: 1719162
Dde_1050 View Structure
3 1573919-1574022 (+)TPP1574328-1574529 (+)Dde_1554

Thiamine biosynthesis protein ThiS
Dde_1554Operon

DOOR ID: 153460
Dde_1554,
Dde_1555,
Dde_1556,
Dde_1557,
Dde_1558
View Structure
4 1574080-1574186 (+)TPP1574328-1574529 (+)Dde_1554

Thiamine biosynthesis protein ThiS
Dde_1554Operon

DOOR ID: 153460
Dde_1554,
Dde_1555,
Dde_1556,
Dde_1557,
Dde_1558
View Structure
5 2347802-2347981 (-)cobalamin2345408-2347685 (-)Dde_2328

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)
Dde_2328Single gene

DOOR ID: 1719519
Dde_2328 View Structure
6 2490976-2491083 (+)SAM2491267-2491540 (+)Dde_2470

Dde_2470Single gene

DOOR ID: 1719574
Dde_2470 View Structure
7 2838359-2838468 (+)glycine2838611-2840003 (+)Dde_2852

Amino acid carrier protein
Dde_2852Single gene

DOOR ID: 1719704
Dde_2852 View Structure
8 3093545-3093727 (+)cobalamin3093861-3094752 (+)Dde_3103

Sirohydrochlorin cobaltochelatase
Dde_3103Operon

DOOR ID: 153732
Dde_3103,
Dde_3104,
Dde_3105,
Dde_3106,
Dde_3107
View Structure